C9Y0Z7 (C9Y0Z7_CROTZ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease E EMBL CBA29936.1
EC=3.1.26.12 EMBL CBA29936.1

Gene names

Name:	rne EMBL CBA29936.1
Ordered Locus Names:	Ctu_16630
ORF Names:	CTU_16630 EMBL CBA29936.1

Organism

Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) [Complete proteome] [HAMAP]

Taxonomic identifier

693216 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Cronobacter › Cronobacter turicensis

Protein attributes

Sequence length	1062 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CBA29936.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9Y0Z7 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 1E359A5D92A03FAC	FASTA	1,062	117,973
	10 20 30 40 50 60 MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY 70 80 90 100 110 120 GAERHGFLPL KEIAREYFPA SYASHGRPNI KDVLREGQEV IVQIDKEERG NKGAALTTFI 130 140 150 160 170 180 SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALSSLEL PDGMGLIVRT AGVGKSAEAL 190 200 210 220 230 240 QWDLSFRLKH WEAIQKAAEN RPAPFLIHQE SNVIVRAFRD YLRQDIGEIL IDNPKVLELA 250 260 270 280 290 300 RQHIAALGRP DFSSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT 310 320 330 340 350 360 AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQRAVE 370 380 390 400 410 420 NRLREAVRQD RARIQISHIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTVRDNESLS 430 440 450 460 470 480 LSILRLIEEE ALKENTQEVH AIVPVPIASY LLNEKREAIT AIETRQGGVR CVIVPNDQME 490 500 510 520 530 540 TPHYSVLRVR KGEETHTLSY MLPKLHEEAM ALPSEEEYAE RKRPEQPALA TFVMPDVPPM 550 560 570 580 590 600 PQETSAPAAE PAAPKAPVKA AEPAKEGFLS RAISALKSLF ASEPQAQPVA SEPEPQPAKN 610 620 630 640 650 660 REDKPQDRRN GRRQNNRRDR NERGERSERG ERPSRENRDN RDNRDNSEAR EENRRNRREK 670 680 690 700 710 720 QQQNAETREV RAPVAEEVAE KPKSRDDQQQ SPRRDRNRRR SEEKRQAQQE VNVLNRDDAV 730 740 750 760 770 780 EETEQEDRVV QVMPRRKPRQ LSQKVRIESA AEAAAVGNTD APVAETREEA APLALPANVE 790 800 810 820 830 840 TPAAAEDNNQ TGSENAGMPR RSRRSPRHLR VSGQRRRRYR DERYPTQSPM PLTVACASPE 850 860 870 880 890 900 MASGKVWIRY PLPRVQEQEE QQLEQNTAPV AETQTTEAPV APVTDAVVVE PSAVESAPQE 910 920 930 940 950 960 TVVETTYPEA ISTPVDAQPQ IIEPQDEAVA QQVAQNAVAA DAPVAEDAPR EEAAAVMAES 970 980 990 1000 1010 1020 APEEAPQPEA IADEPVKTPE AAPVVAPNAQ ETEVKAPVVA VASASVASAP MTRAPAPDYV 1030 1040 1050 1060 PEPPRHSDWV RPTFDFSGKG SAGGHSATHQ ASAPATRPQP VE

References

[1]	"The complete genome sequence of Cronobacter turicensis." Tischler P., Lehner A., Rattei T., Stephan R. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18703 / LMG 23827 / z3032.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN543093 Genomic DNA. Translation: CBA29936.1.
RefSeq	YP_003210026.1. NC_013282.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	413502.Ctu_16630.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBA29936; CBA29936; CTU_16630.
GeneID	8459016.
KEGG	ctu:CTU_16630.
PATRIC	20403957. VBICroTur2449_1578.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000258027.
KO	K08300.
Enzyme and pathway databases
BioCyc	CTUR693216:GI0P-1719-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012340. NA-bd_OB-fold. IPR021968. PNPase_C. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR019307. RNA-bd_AU-1/RNase_E/G. IPR022967. RNA-binding_domain_S1. IPR004659. RNase_E/G. [Graphical view]
Pfam	PF12111. PNPase_C. 1 hit. PF10150. RNase_E_G. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00757. RNaseEG. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9Y0Z7_CROTZ

Accession

Primary (citable) accession number: C9Y0Z7

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)