C9XQ61 (C9XQ61_CLODC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL CBA62973.1
Ordered Locus Names:	CD196_1554

Organism

Clostridium difficile (strain CD196) [Complete proteome] [HAMAP]

Taxonomic identifier

645462 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	234 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9XQ61 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: E26DF02D360B245B	FASTA	234	27,206
	10 20 30 40 50 60 MKKKILIPVI MSLFIISQCI TSFAFTPENN KFKVKPLPYA YDALEPYIDK ETMKLHHDKH 70 80 90 100 110 120 YQAYVDKLNA ALEKYPELYN YSLCELLQNL DSLPKDIATT VRNNAGGAYN HKFFFDIMTP 130 140 150 160 170 180 EKTIPSESLK EAIDRDFGSF EKFKQEFQKS ALDVFGSGWA WLVATKDGKL SIMTTPNQDS 190 200 210 220 230 PVSKNLTPII GLDVWEHAYY LKYQNRRNEY IDNWFNVVNW NGALENYKNL KSQD

References

[1]

"Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium." Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W. Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CD196.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN538970 Genomic DNA. Translation: CBA62973.1.
RefSeq	YP_003214581.1. NC_013315.1.
3D structure databases
ProteinModelPortal	C9XQ61.
SMR	C9XQ61. Positions 30-228.
ModBase	Search...
Protein-protein interaction databases
STRING	645462.CD196_1554.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBA62973; CBA62973; CD196_1554.
GeneID	8464358.
KEGG	cdc:CD196_1554.
PATRIC	19449429. VBICloDif125228_1629.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013584.
KO	K04564.
Enzyme and pathway databases
BioCyc	CDIF645462:GJED-1639-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9XQ61_CLODC

Accession

Primary (citable) accession number: C9XQ61

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)