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C9XQ61 (C9XQ61_PEPDC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodA EMBL CBA62973.1
Ordered Locus Names:CD196_1554 EMBL CBA62973.1
ORF Names:QGC_1497 EMBL EQF72180.1
OrganismPeptoclostridium difficile (strain CD196) (Clostridium difficile) [Complete proteome] [HAMAP] EMBL CBA62973.1
Taxonomic identifier645462 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium

Protein attributes

Sequence length234 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL EQF72180.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9XQ61 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: E26DF02D360B245B

FASTA23427,206
        10         20         30         40         50         60 
MKKKILIPVI MSLFIISQCI TSFAFTPENN KFKVKPLPYA YDALEPYIDK ETMKLHHDKH 

        70         80         90        100        110        120 
YQAYVDKLNA ALEKYPELYN YSLCELLQNL DSLPKDIATT VRNNAGGAYN HKFFFDIMTP 

       130        140        150        160        170        180 
EKTIPSESLK EAIDRDFGSF EKFKQEFQKS ALDVFGSGWA WLVATKDGKL SIMTTPNQDS 

       190        200        210        220        230 
PVSKNLTPII GLDVWEHAYY LKYQNRRNEY IDNWFNVVNW NGALENYKNL KSQD 

« Hide

References

« Hide 'large scale' references
[1]"Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium."
Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W.
Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CD196 EMBL CBA62973.1.
[2]Walk S., Aronoff D., Young V.Y., Marsh J., Harrison L., Daugherty S.C., Shefchek K.A., Hine E.E., Tallon L.J., Sadzewicz L.K., Rasko D.A.
Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CD196 EMBL EQF72180.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN538970 Genomic DNA. Translation: CBA62973.1.
AVIE01000439 Genomic DNA. Translation: EQF72180.1.
RefSeqYP_003214581.1. NC_013315.1.

3D structure databases

ProteinModelPortalC9XQ61.
SMRC9XQ61. Positions 30-228.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING645462.CD196_1554.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBA62973; CBA62973; CD196_1554.
EQF72180; EQF72180; QGC_1497.
GeneID8464358.
KEGGcdc:CD196_1554.
PATRIC19449429. VBICloDif125228_1629.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMAEPHIDTQ.
OrthoDBEOG63NMNT.

Enzyme and pathway databases

BioCycCDIF645462:GJED-1639-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9XQ61_PEPDC
AccessionPrimary (citable) accession number: C9XQ61
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)