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C9XQ61

- C9XQ61_PEPDC

UniProt

C9XQ61 - C9XQ61_PEPDC

Protein

Superoxide dismutase

Gene

sodA

Organism
Peptoclostridium difficile (strain CD196) (Clostridium difficile)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciCDIF645462:GJED-1639-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:CD196_1554Imported
    ORF Names:QGC_1497Imported
    OrganismiPeptoclostridium difficile (strain CD196) (Clostridium difficile)Imported
    Taxonomic identifieri645462 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
    ProteomesiUP000002068: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi645462.CD196_1554.

    Structurei

    3D structure databases

    ProteinModelPortaliC9XQ61.
    SMRiC9XQ61. Positions 30-228.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiEPHIDTQ.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9XQ61-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKKILIPVI MSLFIISQCI TSFAFTPENN KFKVKPLPYA YDALEPYIDK    50
    ETMKLHHDKH YQAYVDKLNA ALEKYPELYN YSLCELLQNL DSLPKDIATT 100
    VRNNAGGAYN HKFFFDIMTP EKTIPSESLK EAIDRDFGSF EKFKQEFQKS 150
    ALDVFGSGWA WLVATKDGKL SIMTTPNQDS PVSKNLTPII GLDVWEHAYY 200
    LKYQNRRNEY IDNWFNVVNW NGALENYKNL KSQD 234
    Length:234
    Mass (Da):27,206
    Last modified:November 24, 2009 - v1
    Checksum:iE26DF02D360B245B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN538970 Genomic DNA. Translation: CBA62973.1.
    AVIE01000439 Genomic DNA. Translation: EQF72180.1.
    RefSeqiYP_003214581.1. NC_013315.1.

    Genome annotation databases

    EnsemblBacteriaiCBA62973; CBA62973; CD196_1554.
    EQF72180; EQF72180; QGC_1497.
    GeneIDi8464358.
    KEGGicdc:CD196_1554.
    PATRICi19449429. VBICloDif125228_1629.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN538970 Genomic DNA. Translation: CBA62973.1 .
    AVIE01000439 Genomic DNA. Translation: EQF72180.1 .
    RefSeqi YP_003214581.1. NC_013315.1.

    3D structure databases

    ProteinModelPortali C9XQ61.
    SMRi C9XQ61. Positions 30-228.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 645462.CD196_1554.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBA62973 ; CBA62973 ; CD196_1554 .
    EQF72180 ; EQF72180 ; QGC_1497 .
    GeneIDi 8464358.
    KEGGi cdc:CD196_1554.
    PATRICi 19449429. VBICloDif125228_1629.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi EPHIDTQ.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci CDIF645462:GJED-1639-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium."
      Stabler R.A., He M., Dawson L., Martin M., Valiente E., Corton C., Lawley T.D., Sebaihia M., Quail M.A., Rose G., Gerding D.N., Gibert M., Popoff M.R., Parkhill J., Dougan G., Wren B.W.
      Genome Biol. 10:R102.1-R102.15(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CD196Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CD196Imported.

    Entry informationi

    Entry nameiC9XQ61_PEPDC
    AccessioniPrimary (citable) accession number: C9XQ61
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3