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C9XDZ7 (C9XDZ7_SALTD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
L-ribulose-5-phosphate 4-epimerase UlaF HAMAP MF_01952
EC=5.1.3.4 HAMAP MF_01952
Alternative name(s):
L-ascorbate utilization protein F HAMAP MF_01952
Phosphoribulose isomerase HAMAP MF_01952
Gene names
Name:ulaF HAMAP MF_01952
Ordered Locus Names:STMMW_43321
OrganismSalmonella typhimurium (strain D23580) [Complete proteome] [HAMAP]
Taxonomic identifier568708 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella typhimurium

Protein attributes

Sequence length228 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization By similarity. HAMAP MF_01952

Catalytic activity

L-ribulose 5-phosphate = D-xylulose 5-phosphate. HAMAP MF_01952

Cofactor

Binds 1 zinc ion per subunit By similarity. HAMAP MF_01952

Pathway

Cofactor degradation; L-ascorbate degradation; D-xylulose 5-phosphate from L-ascorbate: step 4/4. HAMAP MF_01952

Induction

Induced by L-ascorbate. Repressed by UlaR By similarity. HAMAP MF_01952

Sequence similarities

Belongs to the aldolase class II family. AraD/FucA subfamily. HAMAP MF_01952

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding741Zinc By similarity HAMAP MF_01952
Metal binding931Zinc By similarity HAMAP MF_01952
Metal binding951Zinc By similarity HAMAP MF_01952
Metal binding1671Zinc By similarity HAMAP MF_01952

Sequences

Sequence LengthMass (Da)Tools
C9XDZ7 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 16399B00A84E55A8

FASTA22825,327
        10         20         30         40         50         60 
MQKLKQQVFD ANMDLPRYGL VTFTWGNVSA IDRERGLVVI KPSGVAYETM KVDDMVVVDM 

        70         80         90        100        110        120 
DGKVVEGRYR PSSDTATHLA LYQRYPSLGG VVHTHSTHAT AWAQAGMAIP ALGTTHADYF 

       130        140        150        160        170        180 
FGDIPCTRAL SEEEVQGEYE LNTGKVIIET LGEVEPLHTP GIVVYQHGPF AWGKDAHDAV 

       190        200        210        220 
HNAVVMEEVA RMAWIARGIN PALNPIDDYL MNKHFMRKHG PNAYYGQK

« Hide

References

[1]"Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype."
Kingsley R.A., Msefula C.L., Thomson N.R., Kariuki S., Holt K.E., Gordon M.A., Harris D., Clarke L., Whitehead S., Sangal V., Marsh K., Achtman M., Molyneux M.E., Cormican M., Parkhill J., Maclennan C.A., Heyderman R.S., Dougan G.
Genome Res. 19:2279-2287(2009) [PubMed: 19901036] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN424405 Genomic DNA. Translation: CBG27343.1.

3D structure databases

ProteinModelPortalC9XDZ7.
SMRC9XDZ7. Positions 1-219.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus STMMW_43321 in contig FN424405_GR.
PATRIC36730543. VBISalEnt111430_4633.

Organism-specific databases

CMRSearch...

Family and domain databases

HAMAPMF_01952. UlaF.
[Tree]
InterProIPR001303. Aldolase_II/adducin_N.
IPR023499. UlaF.
[Graphical view]
Gene3DG3DSA:3.40.225.10. Aldolase_II/adducin_N. 1 hit.
PfamPF00596. Aldolase_II. 1 hit.
[Graphical view]
SMARTSM01007. Aldolase_II. 1 hit.
[Graphical view]
SUPFAMSSF53639. Aldolase_II_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9XDZ7_SALTD
AccessionPrimary (citable) accession number: C9XDZ7
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 25, 2012
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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