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Protein

Superoxide dismutase

Gene

VDBG_08961

Organism
Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi60Divalent metal cationUniRule annotation1
Metal bindingi108Divalent metal cationUniRule annotation1
Metal bindingi194Divalent metal cationUniRule annotation1
Metal bindingi198Divalent metal cationUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:VDBG_08961Imported
OrganismiVerticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)Imported
Taxonomic identifieri526221 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeGlomerellalesPlectosphaerellaceaeVerticillium
Proteomesi
  • UP000008698 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi526221.XP_003001165.1

Structurei

3D structure databases

ProteinModelPortaliC9SVN6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 116Sod_Fe_NInterPro annotationAdd BLAST80
Domaini126 – 227Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0876 Eukaryota
COG0605 LUCA
KOiK04564
OrthoDBiEOG092C4NQ6

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

C9SVN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSTLLRSTP AVRAALRTRA ASTASLAGAS FVRGKATLPD LQYDYGALEP
60 70 80 90 100
YISGQIMELH HSKHHQTYVN GLNTALETVA EAESKGDYTK AASQAPLINF
110 120 130 140 150
HGGGHLNHSL FWENLAPASQ NGGGEPDGAL AKAITKDFGS FDTLRKQTNA
160 170 180 190 200
ALAGIQGSGW AWIVKDKTSG TLSLVTRANQ DPITGNLEPL LGIDAWEHAY
210 220 230
YLQYQNRKAE YFDAIWNVVN WKAVASRFEK
Length:230
Mass (Da):24,963
Last modified:November 24, 2009 - v1
Checksum:iB3B32840B644904E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS985226 Genomic DNA Translation: EEY22851.1
RefSeqiXP_003001165.1, XM_003001119.1

Genome annotation databases

EnsemblFungiiEEY22851; EEY22851; VDBG_08961
GeneIDi9534559
KEGGival:VDBG_08961

Similar proteinsi

Entry informationi

Entry nameiC9SVN6_VERA1
AccessioniPrimary (citable) accession number: C9SVN6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 23, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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