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C9SP42 (C9SP42_VERA1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length944 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL EEY20557.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9SP42 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 448065C4B55155B6

FASTA944107,488
        10         20         30         40         50         60 
MSHREGQPSP SAAAIGEDER QYAVGGMTSQ EVNENYPGRP RNHSETFLFS ELFKSLFNPL 

        70         80         90        100        110        120 
MENKKQPPGS GPPRAKLGPH GPSKPSPSEQ RRHIIDRFIS RWRKNVGHDF YPAMRLILPD 

       130        140        150        160        170        180 
KDRDRGVYGL KENAIGKLLV KLMKIDKNSE DGYNLLHWKL PGQTTASRMA GDFAGRAFEV 

       190        200        210        220        230        240 
LSKRPMRIEV GDMTIADVNE LLDKLAGSSG ELENLEVFET FYERMNAEEL MWLIRIILKQ 

       250        260        270        280        290        300 
MKVGATEKTL LHLWHPDAET LFNVSSSLRR VCWELFDPQV RLEQENTGVT LMQCFQPQLA 

       310        320        330        340        350        360 
QFQMPASFQK MVDYLRPPRG SRGLKDDRGA WTRHLGKAFA AGVRNIILDG EMITWDPDTD 

       370        380        390        400        410        420 
KIMQFGTLKT AALAEQKNPY NNTGPRPLFR VFDILYLNDQ PLTRYTLRDR YNALRKAVIG 

       430        440        450        460        470        480 
VHRRIEVHEH EAATSADAIE PLLRKVVAEA SEGLVLKNPR SMYRLNSRND DWLKVKPEYM 

       490        500        510        520        530        540 
TEFGESLDCV VIGGYYGSGK RGGILSTYLC GLRVSENHIK AGANPEKCFS LFKVGGGFSV 

       550        560        570        580        590        600 
EDYAEIRHHT DGKWKDWDPK KPPNEYIELA HGFAEKPDVW IRPKDSFVLE AKASSVGPSD 

       610        620        630        640        650        660 
QFALGFTLRF PRFRKLRKDK SWDQGLSVQE FQDLRRRVEE EAQEKTMSVE NTKRRAVKRV 

       670        680        690        700        710        720 
KKELVIAGTD STPVQFEGEK SKVFEGLEFC VLSESLKPFK KTKTQLETTI KANGGRITQR 

       730        740        750        760        770        780 
HAARSDLILI ADKRVVSVAS LIKKGDVDII RPNWVQDCLA QETDDGLLPY EERHLFHATE 

       790        800        810        820        830        840 
GLREIARQNT DEFGDSYFRI VDVEELRQIL VDMSPHEKSE ERDEDAAEFA RQLKERGNDL 

       850        860        870        880        890        900 
GERDSAVFGR CVVHLHVLPG GELDAFRLRN YIAFGGGEVT DGLPVDSSTH IMLVGGRDAE 

       910        920        930        940 
KQDAAVSVRK DIGNRQKIPR VVASQWVEDS WKERTMLDEE RYRV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS985221 Genomic DNA. Translation: EEY20557.1.
RefSeqXP_003003105.1. XM_003003059.1.

3D structure databases

ProteinModelPortalC9SP42.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9537149.
KEGGval:VDBG_06667.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEPS50172. BRCT. 2 hits.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9SP42_VERA1
AccessionPrimary (citable) accession number: C9SP42
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)