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Protein

Glutamate decarboxylase

Gene

VDBG_01731

Organism
Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:VDBG_01731Imported
OrganismiVerticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)Imported
Taxonomic identifieri526221 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeGlomerellalesPlectosphaerellaceaemitosporic PlectosphaerellaceaeVerticillium
ProteomesiUP000008698 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi526221.XP_003007543.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C9SB72-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRNQLDLDG KPNLNLASFV STFLEPNAQQ LMEENLTKNL ADSDEYPAMM
60 70 80 90 100
DIHQRCISII AHLWGVQPGE RAIGSACTGS SEAIHLGGLA MKRRWQEKRK
110 120 130 140 150
AEGKDASKPN IIMGANAQVA LEKFARYFEV EARILPVSAK SRFRLDPELV
160 170 180 190 200
KENIDENTIG VFVILGSTYT GHYEPVEEIS KILDDFEAKT GIDIPIHVDA
210 220 230 240 250
ASGGFIAPFT DAGAGGAKWN FELPRVKSIN TSGHKFGLVS AGLGWIIWRD
260 270 280 290 300
EAYLPEFLVF ELHYLGGTEK SYTLNFSRPG AQVVVQYYNL VHLGFSGYRG
310 320 330 340 350
IMENCLANAR LLANSLEETG WYTVVSDIHR RVDGGSDRAP KSGTEGAEQE
360 370 380 390 400
TPRETSADYV AGLPVVSFRL TDEFQKQYSH IKQETVSLFL RAKGWIIPNY
410 420 430 440 450
ALPPSEEKTE ILRVVVRENM TFDLLELLLT DIVTVTETLI ENDQVDLSSL
460 470 480 490
KRHHIGHGRR PVTKQDHERH KRRLEGHGKK RLQDGIHRTV C
Length:491
Mass (Da):54,995
Last modified:November 24, 2009 - v1
Checksum:i358782D725657554
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS985215 Genomic DNA. Translation: EEY15622.1.
RefSeqiXP_003007543.1. XM_003007497.1.

Genome annotation databases

GeneIDi9535006.
KEGGival:VDBG_01731.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS985215 Genomic DNA. Translation: EEY15622.1.
RefSeqiXP_003007543.1. XM_003007497.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi526221.XP_003007543.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9535006.
KEGGival:VDBG_01731.

Phylogenomic databases

KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: VaMs.102 / ATCC MYA-4576 / FGSC 10136Imported.

Entry informationi

Entry nameiC9SB72_VERA1
AccessioniPrimary (citable) accession number: C9SB72
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.