C9S6B2 (C9S6B2_VERA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA polymerase II transcription factor B subunit 5 EMBL EEY14424.1

Gene names

ORF Names:

VDBG_00532 EMBL EEY14424.1

Organism

Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt) [Complete proteome]

Taxonomic identifier

526221 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Pezizomycotina › leotiomyceta › sordariomyceta › Sordariomycetes › Hypocreomycetidae › Glomerellales › Plectosphaerellaceae › mitosporic Plectosphaerellaceae › Verticillium › Verticillium albo-atrum

Protein attributes

Sequence length	71 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nucleotide-excision repair Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular_component	core TFIIH complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9S6B2 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 08CFBF56C95AF199	FASTA	71	8,108
	10 20 30 40 50 60 MPRAIRGVLV ECDPSIKSII VNIDSSNHDF IIEDLDDQRV VVKENMVGEL KRRLDDRLKE 70 TQQIVEDSGS E

References

[1]

"Annotation of Verticillium albo-atrum VaMs.102." The Broad Institute Genome Sequencing Platform Ma L.-J.J., Klosterman S.J., Subbarao K., Dobinson K., Veronese P., Kang S., Gold S.E., Young S., Jaffe D., Gnerre S., Berlin A., Heiman D., Hepburn T., Sykes S., Chen Z., Alvarado L., Kodira C.D., Lander E. , Galagan J., Nusbaum C., Birren B. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: VaMs.102 / ATCC MYA-4576 / FGSC 10136.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS985214 Genomic DNA. Translation: EEY14424.1.
RefSeq	XP_003008850.1. XM_003008804.1.
3D structure databases
ProteinModelPortal	C9S6B2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9529205.
KEGG	val:VDBG_00532.
Phylogenomic databases
KO	K10845.
Family and domain databases
Gene3D	3.30.70.1220. 1 hit.
InterPro	IPR009400. TFIIH_TTDA/Tfb5. [Graphical view]
Pfam	PF06331. Tbf5. 1 hit. [Graphical view]
SUPFAM	SSF142897. SSF142897. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C9S6B2_VERA1

Accession

Primary (citable) accession number: C9S6B2

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)