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Protein
Submitted name:

RNA polymerase II transcription factor B subunit 5

Gene

VDBG_00532

Organism
Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase II transcription factor B subunit 5Imported
Gene namesi
ORF Names:VDBG_00532Imported
OrganismiVerticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)Imported
Taxonomic identifieri526221 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeGlomerellalesPlectosphaerellaceaeVerticillium
Proteomesi
  • UP000008698 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

ProteinModelPortaliC9S6B2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J2Z6 Eukaryota
ENOG41127YJ LUCA
KOiK10845
OrthoDBiEOG092C5WAI

Family and domain databases

Gene3Di3.30.70.1220, 1 hit
InterProiView protein in InterPro
IPR035935 TFB5-like_sf
IPR009400 TFIIH_TTDA/Tfb5
PANTHERiPTHR28580 PTHR28580, 1 hit
PfamiView protein in Pfam
PF06331 Tfb5, 1 hit
SMARTiView protein in SMART
SM01395 Tbf5, 1 hit
SUPFAMiSSF142897 SSF142897, 1 hit

Sequencei

Sequence statusi: Complete.

C9S6B2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRAIRGVLV ECDPSIKSII VNIDSSNHDF IIEDLDDQRV VVKENMVGEL
60 70
KRRLDDRLKE TQQIVEDSGS E
Length:71
Mass (Da):8,108
Last modified:November 24, 2009 - v1
Checksum:i08CFBF56C95AF199
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS985214 Genomic DNA Translation: EEY14424.1
RefSeqiXP_003008850.1, XM_003008804.1

Genome annotation databases

EnsemblFungiiEEY14424; EEY14424; VDBG_00532
GeneIDi9529205
KEGGival:VDBG_00532

Similar proteinsi

Entry informationi

Entry nameiC9S6B2_VERA1
AccessioniPrimary (citable) accession number: C9S6B2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: March 28, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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