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C9RXR8 (C9RXR8_GEOSY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA polymerase III subunit beta PIRNR PIRNR000804
EC=2.7.7.7 PIRNR PIRNR000804
Gene names
Ordered Locus Names:GYMC61_0002 EMBL ACX76702.1
OrganismGeobacillus sp. (strain Y412MC61) [Complete proteome] [HAMAP] EMBL ACX76702.1
Taxonomic identifier544556 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity. PIRNR PIRNR000804 SAAS SAAS022634

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). PIRNR PIRNR000804 SAAS SAAS022634

Subcellular location

Cytoplasm By similarity PIRNR PIRNR000804.

Sequences

Sequence LengthMass (Da)Tools
C9RXR8 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 6B9ADEAD96ECE0FA

FASTA37842,063
        10         20         30         40         50         60 
MNISIDREAL AKSVQDVMKA VSTRTTIPIL TGIKLTATAS GVTLTGSDSD ISIESFIPLE 

        70         80         90        100        110        120 
KEGKLLVDVK RPGSIVLQAR FFSEIVKKLP QQTVEIERED NFLTIIRSGH SEFRLNGLNA 

       130        140        150        160        170        180 
DEYPRLPQIE EENVFQIPAD LLKTVIRQTV FAVSTSETRP ILTGVNWKVE HGELVCTATD 

       190        200        210        220        230        240 
SHRLAMRKVK IESENEVSYN VVIPGKSLNE LSKILDDGNH PVDIVMTANQ VLFKAEHLLF 

       250        260        270        280        290        300 
FSRLLDGNYP ETARLIPTES KTTMIVNAKE FLQAIDRASL LAREGRNNVV KLTTLPGGML 

       310        320        330        340        350        360 
EISSISPEIG KVTEQLQTES LEGEELNISF SAKYMMDALR ALDGTDIQIS FTGAMRPFLL 

       370 
RPLHTDSMLQ LILPVRTY

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References

[1]"Complete sequence of chromosome of Geobacillus sp. Y412MC61."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC61 EMBL ACX76702.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001794 Genomic DNA. Translation: ACX76702.1.
RefSeqYP_003251184.1. NC_013411.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING544556.GYMC61_0002.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX76702; ACX76702; GYMC61_0002.
GeneID8523773.
KEGGgyc:GYMC61_0002.
PATRIC32161336. VBIGeoSp85804_0002.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0592.
HOGENOMHOG000071792.
KOK02338.
OMADYNRVIP.

Enzyme and pathway databases

BioCycGSP544556:GI3L-42-MONOMER.

Family and domain databases

InterProIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00663. dnan. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9RXR8_GEOSY
AccessionPrimary (citable) accession number: C9RXR8
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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