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C9RWQ1 (C9RWQ1_GEOSY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Thymidine kinase HAMAP-Rule MF_00124 RuleBase RU000544

EC=2.7.1.21 HAMAP-Rule MF_00124 RuleBase RU000544
Gene names
Name:tdk HAMAP-Rule MF_00124
Ordered Locus Names:GYMC61_3437 EMBL ACX79985.1
OrganismGeobacillus sp. (strain Y412MC61) [Complete proteome] [HAMAP] EMBL ACX79985.1
Taxonomic identifier544556 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020634

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020634.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding15 – 228ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding88 – 914ATP By similarity HAMAP-Rule MF_00124

Sites

Active site891Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1481Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124
Metal binding1861Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
C9RWQ1 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 9C92F9565C9B2C66

FASTA20722,583
        10         20         30         40         50         60 
MYVMTQSGWL EVICGCMFSG KSEELIRRVR RAQFAKQEVK VFKPTIDNRY SEDAVVSHNG 

        70         80         90        100        110        120 
NSVIAIPVAT PAEMFRYISA ATDVVAIDEV QFFSDDIIDV VQTLADGGCR VIAAGLDQDF 

       130        140        150        160        170        180 
RGEPFGPVPA LMAIAESVTK LQAVCTVCGS PASRTQRLIN GAPASYDDPV ILVGASEAYE 

       190        200 
PRCRHHHEVP GKPKKRYNRP LAGHTGE 

« Hide

References

[1]"Complete sequence of chromosome of Geobacillus sp. Y412MC61."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC61 EMBL ACX79985.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001794 Genomic DNA. Translation: ACX79985.1.
RefSeqYP_003254467.1. NC_013411.1.

3D structure databases

ProteinModelPortalC9RWQ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING544556.GYMC61_3437.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX79985; ACX79985; GYMC61_3437.
GeneID8527325.
KEGGgyc:GYMC61_3437.
PATRIC32168775. VBIGeoSp85804_3607.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1435.
HOGENOMHOG000076390.
KOK00857.
OMATMRKTEE.
OrthoDBEOG69D3J2.

Enzyme and pathway databases

BioCycGSP544556:GI3L-3554-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9RWQ1_GEOSY
AccessionPrimary (citable) accession number: C9RWQ1
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)