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C9RVW2 (C9RVW2_GEOSY) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.98 EMBL ACX79827.1
Gene names
Ordered Locus Names:GYMC61_3273 EMBL ACX79827.1
OrganismGeobacillus sp. (strain Y412MC61) [Complete proteome] [HAMAP] EMBL ACX79827.1
Taxonomic identifier544556 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C9RVW2 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 41212347066E7994

FASTA54962,611
        10         20         30         40         50         60 
MLTFHRIIRK GWMFLLAFLL TASLFCPTGQ PAKAAAPFNG TMMQYFEWYL PDDGALWTKV 

        70         80         90        100        110        120 
ANEANNLSSL GITALWLPPA YKGTSRSDVG YGVYDLYDLG EFNQKGTVRT KYGTKAQYLQ 

       130        140        150        160        170        180 
AIQAAHAAGM QVYADVVFDH KGGADGTEWV DAVEVNPSDR NQEISGTYQI QAWTKFDFPG 

       190        200        210        220        230        240 
RGNTYSSFKW RWYHFDGVDW DESRKLSRIY KFRGIGKAWD WEVDTENGNY DYLMYADLDM 

       250        260        270        280        290        300 
DHPEVVTELK NWGKWYVNTT NIDGFRLDAV KHIKFSFFPD WLSYVRSQTG KPLFTVGEYW 

       310        320        330        340        350        360 
SYDINKLHNY ITKTNGTMSL FDAPLHNKFY TASKSGGAFD MRTLMTNTLM KDQPTLAVTF 

       370        380        390        400        410        420 
VDNHDTEPGQ ALQSWVDPWF KPLAYAFILT RQEGYPCVFY GDYYGIPQYN IPSLKSKIDP 

       430        440        450        460        470        480 
LLIARRDYAY GTQHDYLDHS DIIGWTREGV TEKPGSGLAA LITDGPGGSK WMYVGKQHAG 

       490        500        510        520        530        540 
KVFYDLTGNR SDTVTINSDG WGEFKVNGGS VSVWVPRKTT VSTIAWPITT RPWTGEFVRW 


TEPRLVAWP 

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References

[1]"Complete sequence of chromosome of Geobacillus sp. Y412MC61."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC61 EMBL ACX79827.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001794 Genomic DNA. Translation: ACX79827.1.
RefSeqYP_003254309.1. NC_013411.1.

3D structure databases

ProteinModelPortalC9RVW2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING544556.GYMC61_3273.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX79827; ACX79827; GYMC61_3273.
GeneID8527161.
KEGGgyc:GYMC61_3273.
PATRIC32168419. VBIGeoSp85804_3428.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAFFHWYYP.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycGSP544556:GI3L-3390-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9RVW2_GEOSY
AccessionPrimary (citable) accession number: C9RVW2
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)