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C9RVI2 (C9RVI2_GEOSY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:GYMC61_1091 EMBL ACX77753.1
OrganismGeobacillus sp. (strain Y412MC61) [Complete proteome] [HAMAP] EMBL ACX77753.1
Taxonomic identifier544556 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACX77753.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9RVI2 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 8008AE12BDA23A52

FASTA38442,923
        10         20         30         40         50         60 
MDEFHRDTWV EIDLDAIYDN VANLRRFLPG GTQIMAVVKA NAYGHGDAQV AATALEAGAS 

        70         80         90        100        110        120 
RLAVAFLDEA LALRKKGIDA PILVLGASRP EDVALAAEHR IALTVFRSDW LEKASSLYNG 

       130        140        150        160        170        180 
STPIHFHLKM DTGMGRLGVK DEEETKRIAA LIDRHPPFVL EGVYTHFATA DEVNTDYFSY 

       190        200        210        220        230        240 
QYARFLHMLD WLPSRPPLVH CANSAAALRF SDRAFNMVRF GISMYGLAPS PDIKPLLPYE 

       250        260        270        280        290        300 
LKEAFSLHSR LVHVKKLQPG EKVSYGATYT AQTEEWIGTI PIGYADGWLR RLQHFHVLVG 

       310        320        330        340        350        360 
GQRAPIVGRI CMDQCMIRLP EPLPVGTKVT LIGRQGDEVI SIDDVARHLG TINYEVPCTI 

       370        380 
SYRVPRIFFR NKRIMEVRNA VGRG

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References

[1]"Complete sequence of chromosome of Geobacillus sp. Y412MC61."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brumm P., Mead D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC61 EMBL ACX77753.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001794 Genomic DNA. Translation: ACX77753.1.
RefSeqYP_003252235.1. NC_013411.1.

3D structure databases

ProteinModelPortalC9RVI2.
ModBaseSearch...

Protein-protein interaction databases

STRING544556.GYMC61_1091.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX77753; ACX77753; GYMC61_1091.
GeneID8524915.
KEGGgyc:GYMC61_1091.
PATRIC32163712. VBIGeoSp85804_1138.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMADELGHHF.

Enzyme and pathway databases

BioCycGSP544556:GI3L-1184-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9RVI2_GEOSY
AccessionPrimary (citable) accession number: C9RVI2
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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