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Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Fisuc_3031

Organism
Fibrobacter succinogenes (strain ATCC 19169 / S85)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
AMP-dependent synthetase and ligaseImported
Gene namesi
Ordered Locus Names:Fisuc_3031Imported
OrganismiFibrobacter succinogenes (strain ATCC 19169 / S85)Imported
Taxonomic identifieri59374 [NCBI]
Taxonomic lineageiBacteriaFibrobacteresFibrobacteralesFibrobacteraceaeFibrobacter
ProteomesiUP000001497: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi59374.Fisuc_3031.

Structurei

3D structure databases

ProteinModelPortaliC9RPS9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229982.
KOiK01895.
OMAiLTRYQFQ.
OrthoDBiEOG60GRR8.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9RPS9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MILNKFLSKI DYKSYEDLYK NFKITIPNDF NFAYDVVDEY AKTEPKREAL
60 70 80 90 100
VWCDDNDESH IYTFKDLSLA SQRTANFLVE QGIQKGDRVM LILRRRYEFW
110 120 130 140 150
FFLLALHRIG AIAIPATNML AAEDLEYRFN AAEIKMVVTY DDPALQKEVD
160 170 180 190 200
KAKSKCESVE KLVTVGQTAR QNWISFYDDY ELFPSTFERP VGDAATHNDD
210 220 230 240 250
IMIVYFTSGT SSNPKMVAHT YTYPLGHIVT AKYWQHVVDG GRHLTVAETG
260 270 280 290 300
WAKALWGKIY GQWIAGSAVF TYDMTTFIPG KLLEKMAEYK VTTFCAPPTV
310 320 330 340 350
YRYILQHGLS KYDLSSLQYC TTAGEALNLD IYNRFYEQTG IRMQEGYGQT
360 370 380 390 400
ELTLTTGNFG FSEPHPGSIG KPSPGYQMEI INAEGKPCEA EEVGELIIKI
410 420 430 440 450
DQGKPFGMFG GYYRNAERTE KVFEGGVYHT GDTAYRDKDG FFWFVGRTDD
460 470 480 490 500
LIKSSGYRIS PFEVEEVLHK HPAVLEVAVT GVEDKSRGQA VKATVVLQKG
510 520 530 540 550
YEASKELAKE IQLFAKNIAA SYKSPRIIDF VTELPKTISG KIRRATIRDK
560 570
DTAENVTAPD EANAENAASE TSEEK
Length:575
Mass (Da):65,083
Last modified:November 24, 2009 - v1
Checksum:i9D4416A4F6EE9809
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001792 Genomic DNA. Translation: ACX76611.1.
RefSeqiYP_003251093.1. NC_013410.1.

Genome annotation databases

EnsemblBacteriaiACX76611; ACX76611; Fisuc_3031.
GeneIDi8523678.
KEGGifsu:Fisuc_3031.
PATRICi32145819. VBIFibSuc28982_2957.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001792 Genomic DNA. Translation: ACX76611.1.
RefSeqiYP_003251093.1. NC_013410.1.

3D structure databases

ProteinModelPortaliC9RPS9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59374.Fisuc_3031.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX76611; ACX76611; Fisuc_3031.
GeneIDi8523678.
KEGGifsu:Fisuc_3031.
PATRICi32145819. VBIFibSuc28982_2957.

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229982.
KOiK01895.
OMAiLTRYQFQ.
OrthoDBiEOG60GRR8.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Fibrobacter succinogenes subsp. succinogenes S85."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Weimer P.J.
    , Stevenson D.M., Boyum J., Brumm P.I., Mead D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19169 / S85Imported.

Entry informationi

Entry nameiC9RPS9_FIBSS
AccessioniPrimary (citable) accession number: C9RPS9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.