C9RJ50 (C9RJ50_FIBSS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodB
Ordered Locus Names:	Fisuc_0079, FSU_0477

Organism

Fibrobacter succinogenes (strain ATCC 19169 / S85) [Complete proteome] [HAMAP] EMBL ACX73694.1

Taxonomic identifier

59374 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Fibrobacteres › Fibrobacteria › Fibrobacterales › Fibrobacteraceae › Fibrobacter › Fibrobacter succinogenes › Fibrobacter succinogenes subsp. succinogenes

Protein attributes

Sequence length	199 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ACX73694.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9RJ50 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 1DE20ED468193497	FASTA	199	22,390
	10 20 30 40 50 60 MFEPVNGKFE MPVLPYGMAD LAPALSQETM LFHFGKHLQT YVNNLNAALP GSAFEGKSLE 70 80 90 100 110 120 EIVKTSEGGV FNNAGQILNH AMYFLQFKAP TMSNVPTGEI AKLIERDFGS FEKFQEDFQT 130 140 150 160 170 180 KGAGLFGSGW VWLSALDTGK LVITQEGNAQ NPITKGLKPL LTFDVWEHAY YIDYRNRRPD 190 YLKSLWSIVN WDVVNERLG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Fibrobacter succinogenes subsp. succinogenes S85." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Weimer P.J. , Stevenson D.M., Boyum J., Brumm P.I., Mead D. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19169 / S85.
[2]	"Complete sequence of Fibrobacter succinogenes subsp. succinogenes S85." Durkin A.S., Nelson K.E., Morrison M., Forsberg C.W., Wilson D.B., Russell J.B., Cann I.K.O., Mackie R.I., White B.A. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19169 / S85.
[3]	Durkin A.S., Nelson K.E., Morrison M., Forsberg C.W., Wilson D.B., Russell J.B., Cann I.K.O., Mackie R.I., White B.A. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S85.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001792 Genomic DNA. Translation: ACX73694.1. CP002158 Genomic DNA. Translation: ADL25322.1.
RefSeq	YP_003248176.1. NC_013410.1. YP_005820603.1. NC_017448.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	59374.Fisuc_0079.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX73694; ACX73694; Fisuc_0079. ADL25322; ADL25322; FSU_0477.
GeneID	12432110. 8520662.
KEGG	fsc:FSU_0477. fsu:Fisuc_0079.
PATRIC	32139941. VBIFibSuc28982_0078.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013584.
KO	K04564.
OMA	DYVLERY.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9RJ50_FIBSS

Accession

Primary (citable) accession number: C9RJ50

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)