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Protein

Superoxide dismutase

Gene

sodB

Organism
Fibrobacter succinogenes (strain ATCC 19169 / S85)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:FSU_0477Imported
OrganismiFibrobacter succinogenes (strain ATCC 19169 / S85)Imported
Taxonomic identifieri59374 [NCBI]
Taxonomic lineageiBacteriaFibrobacteresFibrobacteralesFibrobacteraceaeFibrobacter
Proteomesi
  • UP000000517 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi59374.Fisuc_0079.

Structurei

3D structure databases

ProteinModelPortaliC9RJ50.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 8679Sod_Fe_NInterPro annotationAdd
BLAST
Domaini96 – 197102Sod_Fe_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013584.
KOiK04564.
OMAiDSLINWD.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9RJ50-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEPVNGKFE MPVLPYGMAD LAPALSQETM LFHFGKHLQT YVNNLNAALP
60 70 80 90 100
GSAFEGKSLE EIVKTSEGGV FNNAGQILNH AMYFLQFKAP TMSNVPTGEI
110 120 130 140 150
AKLIERDFGS FEKFQEDFQT KGAGLFGSGW VWLSALDTGK LVITQEGNAQ
160 170 180 190
NPITKGLKPL LTFDVWEHAY YIDYRNRRPD YLKSLWSIVN WDVVNERLG
Length:199
Mass (Da):22,390
Last modified:November 24, 2009 - v1
Checksum:i1DE20ED468193497
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002158 Genomic DNA. Translation: ADL25322.1.
RefSeqiWP_012819924.1. NC_017448.1.

Genome annotation databases

EnsemblBacteriaiADL25322; ADL25322; FSU_0477.
KEGGifsc:FSU_0477.
fsu:Fisuc_0079.
PATRICi32139941. VBIFibSuc28982_0078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002158 Genomic DNA. Translation: ADL25322.1.
RefSeqiWP_012819924.1. NC_017448.1.

3D structure databases

ProteinModelPortaliC9RJ50.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59374.Fisuc_0079.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADL25322; ADL25322; FSU_0477.
KEGGifsc:FSU_0477.
fsu:Fisuc_0079.
PATRICi32139941. VBIFibSuc28982_0078.

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013584.
KOiK04564.
OMAiDSLINWD.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC9RJ50_FIBSS
AccessioniPrimary (citable) accession number: C9RJ50
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: September 7, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.