Skip Header

Contribute Send feedback
Read comments (?) or add your own

C9RH19 (C9RH19_METVM) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Probable thymidylate kinase HAMAP-Rule MF_00165
EC=2.7.4.9 HAMAP-Rule MF_00165
Alternative name(s):
dTMP kinase HAMAP-Rule MF_00165
Gene names
Name:tmk HAMAP-Rule MF_00165
Ordered Locus Names:Metvu_1013
OrganismMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) (Methanococcus vulcanius) [Complete proteome] [HAMAP]
Taxonomic identifier579137 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus ›

Protein attributes

Sequence length187 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + dTMP = ADP + dTDP. HAMAP-Rule MF_00165

Sequence similarities

Belongs to the thymidylate kinase family. HAMAP-Rule MF_00165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding7 – 148ATP By similarity HAMAP-Rule MF_00165

Sequences

Sequence LengthMass (Da)Tools
C9RH19 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 5141D762F0782268

FASTA18721,605
        10         20         30         40         50         60 
MFIVFEGIDG SGKTTISKKL AKSINAFWTY EPSNSVVGEL IRKILSGNVK VDDKTLALLF 

        70         80         90        100        110        120 
SADRIEHNKK IKEELRYRDV VCDRYLYSSI AYQSVAGVDE DFIRSINRYA LKPDLVFLLI 

       130        140        150        160        170        180 
CDIETALKRI NTKDIFEKKE FLEKVQEKYL DLAKKEGFVI IDTTDRTVED VYSEVFKTVK 


LRSNYGF

« Hide

References

[1]"Complete sequence of chromosome of Methanocaldococcus vulcanius M7."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001787 Genomic DNA. Translation: ACX72871.1.
RefSeqYP_003247353.1. NC_013407.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING579137.Metvu_1013.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX72871; ACX72871; Metvu_1013.
GeneID8513350.
KEGGmvu:Metvu_1013.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0125.
HOGENOMHOG000229077.
KOK00943.
OMAYLYSSIA.

Enzyme and pathway databases

BioCycMVUL579137:GHFP-1024-MONOMER.

Family and domain databases

HAMAPMF_00165. Thymidylate_kinase.
InterProIPR027417. P-loop_NTPase.
IPR018095. Thymidylate_kin_CS.
IPR018094. Thymidylate_kinase.
[Graphical view]
PANTHERPTHR10344. PTHR10344. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00041. DTMP_kinase. 1 hit.
PROSITEPS01331. THYMIDYLATE_KINASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9RH19_METVM
AccessionPrimary (citable) accession number: C9RH19
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 29, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info