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C9RGZ0 (C9RGZ0_METVM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACX72842.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9RGZ0 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: A2E35BB843A5A98C

FASTA42547,952
        10         20         30         40         50         60 
MDYINLNYTP KESDLLSCMI IKGDDLKKLA NEIAGESSIG TWTKVQTMKS DIYEKLKPNV 

        70         80         90        100        110        120 
YEIKEIGNDG KYKIGLIKIA YPLYDFEINN MPGVLAGIAG NIFGMKIAKG LRILDFRFPK 

       130        140        150        160        170        180 
EFIDEYEGPE YGIEGVRNTL KIKERPLLGT IVKPKVGLKT EEHAKVAYEA WVGGVDLVKD 

       190        200        210        220        230        240 
DENLTSQDFN KFEDRVYKTL EMRDKAEEET GERKAYMPNI TAPYNEMIRR AEIAEDAESE 

       250        260        270        280        290        300 
YVMIDVVVSG FSAVQSFREE NFGFIIHAHR AMHAAMTRSK DFGITMLTLA KIYRLLGVDQ 

       310        320        330        340        350        360 
LHIGTVVGKM EGEEREVKAI RDEIVYDKVE ADNEHKFFEQ EWFGLNSVFP VSSGGVHPRL 

       370        380        390        400        410        420 
VPKIVEILGR DVIIQAGGGI HGHPDGTRAG AKAMRAAIEA VMEGKPLEEK AEEVIELKKA 


LEYWK 

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References

[1]"Complete sequence of chromosome of Methanocaldococcus vulcanius M7."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001787 Genomic DNA. Translation: ACX72842.1.
RefSeqYP_003247324.1. NC_013407.1.

3D structure databases

ProteinModelPortalC9RGZ0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579137.Metvu_0984.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX72842; ACX72842; Metvu_0984.
GeneID8513321.
KEGGmvu:Metvu_0984.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAHRAMHAA.

Enzyme and pathway databases

BioCycMVUL579137:GHFP-995-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9RGZ0_METVM
AccessionPrimary (citable) accession number: C9RGZ0
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 22, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)