C9RGL5 (C9RGL5_METVM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase II, large subunit DP2 EMBL ACX72717.1
EC=2.7.7.7 EMBL ACX72717.1

Gene names

Ordered Locus Names:

Metvu_0859

Organism

Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) (Methanococcus vulcanius) [Complete proteome] [HAMAP]

Taxonomic identifier

579137 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	1609 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Nucleotidyltransferase EMBL ACX72717.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA catabolic process Inferred from electronic annotation. Source: InterPro DNA replication Inferred from electronic annotation. Source: InterPro intein-mediated protein splicing Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9RGL5 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 6863F49EA8059E6B	FASTA	1,609	184,482
	10 20 30 40 50 60 MIHVACSENM RKYFENIVKE VEKLYKIAEE CRSRGFDPTD EVEIPLAVDM ADRVEGLVGP 70 80 90 100 110 120 KGVAKRIREL VKELGKEPAS LEIAKEIVEG KFGNFEKEKK AEQAVRTALA VLTEGIVAAP 130 140 150 160 170 180 LEGIADVKIK KNPDGTEYLA IYYAGPIRSA GGTAQALSVL VGDFVRKAMN LDKYKPTEDE 190 200 210 220 230 240 IERYVEEVEL YQSEVGSFQY SPTADEIRTA IRNIPIEITG EATDNVEVSG HRDLPRVETN 250 260 270 280 290 300 QIRGGALLVL VEGVLLKAPK ILRHVDKLGI EGWDWLKDLK GKKDDNKSEE KVEDEEIDEE 310 320 330 340 350 360 NDEELEGYWR DVNIEANKKF ISEVIAGRPV FAHPSKVGGF RLRYGRSRNT GFATQGFHPA 370 380 390 400 410 420 LMYLVDEFMA VGTQLKTERP GKATCVVPVD SIEPPIVRLK NGDVVRVETA EKAIELRNRV 430 440 450 460 470 480 DEILFLGDVL VNYGDFLENN HPLLPSCWCE EWYEQLLKSK NISYNEEFIG NPRPDEAVKF 490 500 510 520 530 540 ALETKTPLHP RFTYHWHDVS KEEIILLRNW LLKGKEDNFE GKKVWIVDLE TEEDKKAKRV 550 560 570 580 590 600 LELIGCCHLV RNKKVVIEEY YPLLYSLGFD VENKKDLVEN IEETANSAKN SIHFVNLLSP 610 620 630 640 650 660 FEVRRNTYVY VGARMGRPEK AAPRKMKPPV NGLFPIGNAG GQVRLINKAV EENNTDDIDV 670 680 690 700 710 720 SYAVCPKCEK ISLYRVCPFC GTKVELNKFG KIKAPLKDYW YNALKRLGIN KPGDVKCIKG 730 740 750 760 770 780 MTSKQKIVEP LEKAILRAMN EVYVFKDGTT RFDCTDVPIT HFKPSEINVS VEKLKELGYE 790 800 810 820 830 840 KDIHGRELVD EDQVLELKPQ DVIIPENCAE YFVKVANFID ELLEKLYKMD RFYNVKEKKD 850 860 870 880 890 900 LIGHLVIGMA PHTSAGMVGR IIGYTEARVG YAHPYFHAAK RRNCFPGDTR ILVNIDGNVE 910 920 930 940 950 960 RITLKELYEL FDEKYEVFEN DAFVRKKPLN NKNIKVYSFN PEHKNVVLTD IEEVIKLESP 970 980 990 1000 1010 1020 NHQIKITLDG NREFITTHDH SVMVYENGKF IKKLAMDVKE GDLMLIPKVD FEEDNIEEFD 1030 1040 1050 1060 1070 1080 LLKEFSKEEF KDLWSILRVI GISNWIKENI GKELIRELKL DEYLKYDTIP LDKLLILLEK 1090 1100 1110 1120 1130 1140 SNLTIDEVPK NCYIAVKDDK TNINRIIKIE PLLKLIGYYL SEGYARESKT VYQINFSNSE 1150 1160 1170 1180 1190 1200 EEIRENIKKS IKEAFGGINV YESKEEGKLS LSSRVVYLFF TRVLKIGKNA KSKRIPSFIF 1210 1220 1230 1240 1250 1260 KLPKEKVKLM LSAYFDVEGS ISNTKPRISV YSINKTLLED IDLLLNRFGI KTYWIDDKNV 1270 1280 1290 1300 1310 1320 EGGGKENPKL AVYALNISGY YCDIFFKEIG FFLKRKQMIY ELHKNKVRKN DSTEHNFGWI 1330 1340 1350 1360 1370 1380 VKVKKVEIIK SNDEFIYTLN AKKYHNVIIN ENIQTFQCDG DEDSFFLLLD AFLNFSKKFL 1390 1400 1410 1420 1430 1440 PDKRGGQMDA PLVLTTILDP KEVDGEVHNM DTMWSYPLEF YEKTLEMPSP KDVKDIMETV 1450 1460 1470 1480 1490 1500 EDRLGKPEQY EGIGYTHETS RVDLGPKVCA YKTLGSMLEK TASQLLVAKK IRATDEKDVA 1510 1520 1530 1540 1550 1560 EKVIQSHFIP DLIGNLRAFS RQSVRCKCGA KFRRVPLRGK CPKCGSKLIL TVSKGAVEKY 1570 1580 1590 1600 MDVAEKMAEQ YDVNNYIKQR LKIIREGINS IFENDKSKQV KLSDFFKIG

References

[1]

"Complete sequence of chromosome of Methanocaldococcus vulcanius M7." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001787 Genomic DNA. Translation: ACX72717.1.
RefSeq	YP_003247199.1. NC_013407.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C9RGL5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8513196.
GenomeReviews	Gene locus Metvu_0859 in contig CP001787_GR.
KEGG	mvu:Metvu_0859.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	NCDGDED.
Family and domain databases
HAMAP	MF_00324. DNApol_II_L_arch. [Tree]
InterPro	IPR003587. Hedgehog_hint_N. IPR006142. INTEIN. IPR004042. Intein_endonuc. IPR006141. Intein_splice_site. IPR004475. PolC_DP2. IPR016033. PolC_DP2_N. [Graphical view]
KO	K02322.
Pfam	PF03833. PolC_DP2. 1 hit. [Graphical view]
PRINTS	PR00379. INTEIN.
SMART	SM00306. HintN. 1 hit. [Graphical view]
TIGRFAMs	TIGR01445. Intein_Nterm. 1 hit. TIGR00354. PolC. 1 hit.
PROSITE	PS50819. INTEIN_ENDONUCLEASE. 1 hit. PS50817. INTEIN_N_TER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9RGL5_METVM

Accession

Primary (citable) accession number: C9RGL5

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)