C9RGH7 (C9RGH7_METVM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACX72679.1

Gene names

Ordered Locus Names:

Metvu_0821

Organism

Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) (Methanococcus vulcanius) [Complete proteome] [HAMAP]

Taxonomic identifier

579137 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus › Methanocaldococcus vulcanius

Protein attributes

Sequence length	390 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACX72679.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C9RGH7 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 89CCEE2958400FB1	FASTA	390	45,932
	10 20 30 40 50 60 MNVLSYDLNK IAEKLNISLK DLNKAFKKRI LRENEYKDVK TLIFKKDFRG IEKGTVIFLN 70 80 90 100 110 120 KNLDVVRGYP KTYRAITLYP TIKKHFVDKV VVEEKLNGYN IRIVKIEGEV YALTRGGHIC 130 140 150 160 170 180 PFTTKKVKKF LDLSILDEFN NYMLCGEMIG KNNPYTPYYY EEVERGYENL GFYIFDIKER 190 200 210 220 230 240 DSNRSLPINE RIALCKKYNL PYVKPLAILD KDTAHLHIKE IINDLNRRKR EGVVMKDPEM 250 260 270 280 290 300 IVPPIKYTTH YTQCEDLRSA FTFFFDLGVD FLFSRVVREG FMSYEFKDSE EDLKKRAEDL 310 320 330 340 350 360 GEAILVPMVE TIRKISNGER VSEDFELIFD SEDDVDEFIY FMRKMKMLIV IKDIKKIDTN 370 380 390 EGVKIKVLIG KIYNKTNDKV ISYLNGTLWE

References

[1]

"Complete sequence of chromosome of Methanocaldococcus vulcanius M7." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001787 Genomic DNA. Translation: ACX72679.1.
RefSeq	YP_003247161.1. NC_013407.1.
3D structure databases
ProteinModelPortal	C9RGH7.
ModBase	Search...
Protein-protein interaction databases
STRING	579137.Metvu_0821.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACX72679; ACX72679; Metvu_0821.
GeneID	8513158.
KEGG	mvu:Metvu_0821.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1423.
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
Enzyme and pathway databases
BioCyc	MVUL579137:GHFP-832-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C9RGH7_METVM

Accession

Primary (citable) accession number: C9RGH7

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)