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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Metvu_0821

Organism
Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) (Methanococcus vulcanius)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMVUL579137:GHFP-832-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Metvu_0821Imported
OrganismiMethanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) (Methanococcus vulcanius)Imported
Taxonomic identifieri579137 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000002063 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi579137.Metvu_0821.

Structurei

3D structure databases

ProteinModelPortaliC9RGH7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

C9RGH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVLSYDLNK IAEKLNISLK DLNKAFKKRI LRENEYKDVK TLIFKKDFRG
60 70 80 90 100
IEKGTVIFLN KNLDVVRGYP KTYRAITLYP TIKKHFVDKV VVEEKLNGYN
110 120 130 140 150
IRIVKIEGEV YALTRGGHIC PFTTKKVKKF LDLSILDEFN NYMLCGEMIG
160 170 180 190 200
KNNPYTPYYY EEVERGYENL GFYIFDIKER DSNRSLPINE RIALCKKYNL
210 220 230 240 250
PYVKPLAILD KDTAHLHIKE IINDLNRRKR EGVVMKDPEM IVPPIKYTTH
260 270 280 290 300
YTQCEDLRSA FTFFFDLGVD FLFSRVVREG FMSYEFKDSE EDLKKRAEDL
310 320 330 340 350
GEAILVPMVE TIRKISNGER VSEDFELIFD SEDDVDEFIY FMRKMKMLIV
360 370 380 390
IKDIKKIDTN EGVKIKVLIG KIYNKTNDKV ISYLNGTLWE
Length:390
Mass (Da):45,932
Last modified:November 24, 2009 - v1
Checksum:i89CCEE2958400FB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001787 Genomic DNA. Translation: ACX72679.1.
RefSeqiWP_015732899.1. NC_013407.1.
YP_003247161.1. NC_013407.1.

Genome annotation databases

EnsemblBacteriaiACX72679; ACX72679; Metvu_0821.
GeneIDi8513158.
KEGGimvu:Metvu_0821.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001787 Genomic DNA. Translation: ACX72679.1.
RefSeqiWP_015732899.1. NC_013407.1.
YP_003247161.1. NC_013407.1.

3D structure databases

ProteinModelPortaliC9RGH7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi579137.Metvu_0821.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX72679; ACX72679; Metvu_0821.
GeneIDi8513158.
KEGGimvu:Metvu_0821.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMVUL579137:GHFP-832-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700851 / DSM 12094 / M7Imported.

Entry informationi

Entry nameiC9RGH7_METVM
AccessioniPrimary (citable) accession number: C9RGH7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 29, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.