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C9RGH7 (C9RGH7_METVM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACX72679.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9RGH7 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 89CCEE2958400FB1

FASTA39045,932
        10         20         30         40         50         60 
MNVLSYDLNK IAEKLNISLK DLNKAFKKRI LRENEYKDVK TLIFKKDFRG IEKGTVIFLN 

        70         80         90        100        110        120 
KNLDVVRGYP KTYRAITLYP TIKKHFVDKV VVEEKLNGYN IRIVKIEGEV YALTRGGHIC 

       130        140        150        160        170        180 
PFTTKKVKKF LDLSILDEFN NYMLCGEMIG KNNPYTPYYY EEVERGYENL GFYIFDIKER 

       190        200        210        220        230        240 
DSNRSLPINE RIALCKKYNL PYVKPLAILD KDTAHLHIKE IINDLNRRKR EGVVMKDPEM 

       250        260        270        280        290        300 
IVPPIKYTTH YTQCEDLRSA FTFFFDLGVD FLFSRVVREG FMSYEFKDSE EDLKKRAEDL 

       310        320        330        340        350        360 
GEAILVPMVE TIRKISNGER VSEDFELIFD SEDDVDEFIY FMRKMKMLIV IKDIKKIDTN 

       370        380        390 
EGVKIKVLIG KIYNKTNDKV ISYLNGTLWE 

« Hide

References

[1]"Complete sequence of chromosome of Methanocaldococcus vulcanius M7."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001787 Genomic DNA. Translation: ACX72679.1.
RefSeqYP_003247161.1. NC_013407.1.

3D structure databases

ProteinModelPortalC9RGH7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579137.Metvu_0821.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX72679; ACX72679; Metvu_0821.
GeneID8513158.
KEGGmvu:Metvu_0821.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMVUL579137:GHFP-832-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9RGH7_METVM
AccessionPrimary (citable) accession number: C9RGH7
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)