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C9RGD6 (C9RGD6_METVM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACX72638.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9RGD6 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: E939E2BB086A1939

FASTA46555,431
        10         20         30         40         50         60 
MLLTFNFEVH QPHRLNKDID QEKTNLWEKY VDVRLNKEVF NKVAEKCYIP TNELILDLID 

        70         80         90        100        110        120 
EYDFKVNYSI TGVFIEQALE FNEYVLDLFK DLVKTGNVEL IAETYHHSLT SLYEDEEEFI 

       130        140        150        160        170        180 
EDIEMHRELY KDLFNYKAKI FRNTELIYNN RIAKIAKDVG FEAIFTEGIE KILGWRSPNY 

       190        200        210        220        230        240 
LYHSPDGMKV LLRNYRLSDD IGFRFSAKDW DQYPLTADKY ATWLASTPGE VINIYMDYET 

       250        260        270        280        290        300 
FGEHHWKETG IFEFLKHLPA EIGKYEHLEV VNVSEVVERL EPRGELYVHE FSTISWADTE 

       310        320        330        340        350        360 
RDVSAWLGNE MQRISFEKLK SLGRFIKKNE EKLKMCGKFK EIYKIYKVLQ TSDNLYYQSI 

       370        380        390        400        410        420 
KGLCDMNVHN YFSHFDTPFD AYATYLNTLY DFEYHIKTLL LNIKSNRRKK EHGSVELYRV 

       430        440        450        460 
EKEDLMKKNL NSLEEAESIY NEKENDKKNR SGSENDKYDN EFIIA 

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References

[1]"Complete sequence of chromosome of Methanocaldococcus vulcanius M7."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Lcollab F.I., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ovchinikova G., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700851 / DSM 12094 / M7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001787 Genomic DNA. Translation: ACX72638.1.
RefSeqYP_003247120.1. NC_013407.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579137.Metvu_0780.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX72638; ACX72638; Metvu_0780.
GeneID8513117.
KEGGmvu:Metvu_0780.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1449.
HOGENOMHOG000224113.
KOK07405.
OMAFEVHQPY.

Enzyme and pathway databases

BioCycMVUL579137:GHFP-791-MONOMER.

Family and domain databases

Gene3D3.20.110.10. 1 hit.
InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMSSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9RGD6_METVM
AccessionPrimary (citable) accession number: C9RGD6
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: October 16, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)