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C9R9G7 (C9R9G7_AMMDK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL ACX52946.1
Gene names
Ordered Locus Names:Adeg_1863 EMBL ACX52946.1
OrganismAmmonifex degensii (strain DSM 10501 / KC4) [Complete proteome] [HAMAP] EMBL ACX52946.1
Taxonomic identifier429009 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeMoorella groupAmmonifex

Protein attributes

Sequence length421 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACX52946.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9R9G7 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 0F22360AF434DC49

FASTA42145,345
        10         20         30         40         50         60 
MRYSDFVELN YTPSPSDCLA CFYVEPAEGV DIYEAAGAVA SESSIGTWTD VATMKPRIWE 

        70         80         90        100        110        120 
ELRARVYAIE GNVVKIAYPA ALFEPGNIPQ YLSSIAGNIF GMKAVKNLRL LDISFPPELV 

       130        140        150        160        170        180 
SGSLGPAFGV QGVRETLGIY GRPLVGTIVK PKLGLSPREQ AEVVYEALVG GLDLVKDDEN 

       190        200        210        220        230        240 
LTSQPFSPFE ERVKRSLEAC ARAEAEAGEK KVYLPNVTAE TEEMIRRAEL VKREGGRYVM 

       250        260        270        280        290        300 
VDIVTAGFSG LLSLRKANLG LIIHAHRAMY ASFARNRRHG ISMLVLAKLA RLAGVDQLHI 

       310        320        330        340        350        360 
GTVVGKMEGD KEDVLRCHAA LGNASPVSGD LLRPQDWGEI KPVLSVASGG LHPGHIPDLI 

       370        380        390        400        410        420 
SIFGVDCVLQ FGGGVHGHPR GTRAGASAVR AAVEAATSGQ SFQEVARREK TLEEAIMHWG 


G 

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References

[1]"Complete sequence of chromosome of Ammonifex degensii KC4."
US DOE Joint Genome Institute
Kerfeld C., Goodner B., Huber H., Stetter K., Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Ovchinnikova G., Richardson P.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10501 / KC4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001785 Genomic DNA. Translation: ACX52946.1.
RefSeqYP_003239796.1. NC_013385.1.

3D structure databases

ProteinModelPortalC9R9G7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING429009.Adeg_1863.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX52946; ACX52946; Adeg_1863.
GeneID8491867.
KEGGadg:Adeg_1863.
PATRIC20883310. VBIAmmDeg104956_1863.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OrthoDBEOG6ZKXMS.

Enzyme and pathway databases

BioCycADEG429009:GHG1-1910-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9R9G7_AMMDK
AccessionPrimary (citable) accession number: C9R9G7
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 22, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)