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Protein
Submitted name:

Ribulose bisphosphate carboxylase, type III

Gene

Adeg_1863

Organism
Ammonifex degensii (strain DSM 10501 / KC4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciADEG429009:GHG1-1910-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, type IIIImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Adeg_1863Imported
OrganismiAmmonifex degensii (strain DSM 10501 / KC4)Imported
Taxonomic identifieri429009 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeMoorella groupAmmonifex
ProteomesiUP000002620: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi429009.Adeg_1863.

Structurei

3D structure databases

ProteinModelPortaliC9R9G7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OrthoDBiEOG6ZKXMS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR03326. rubisco_III. 1 hit.

Sequencei

Sequence statusi: Complete.

C9R9G7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYSDFVELN YTPSPSDCLA CFYVEPAEGV DIYEAAGAVA SESSIGTWTD
60 70 80 90 100
VATMKPRIWE ELRARVYAIE GNVVKIAYPA ALFEPGNIPQ YLSSIAGNIF
110 120 130 140 150
GMKAVKNLRL LDISFPPELV SGSLGPAFGV QGVRETLGIY GRPLVGTIVK
160 170 180 190 200
PKLGLSPREQ AEVVYEALVG GLDLVKDDEN LTSQPFSPFE ERVKRSLEAC
210 220 230 240 250
ARAEAEAGEK KVYLPNVTAE TEEMIRRAEL VKREGGRYVM VDIVTAGFSG
260 270 280 290 300
LLSLRKANLG LIIHAHRAMY ASFARNRRHG ISMLVLAKLA RLAGVDQLHI
310 320 330 340 350
GTVVGKMEGD KEDVLRCHAA LGNASPVSGD LLRPQDWGEI KPVLSVASGG
360 370 380 390 400
LHPGHIPDLI SIFGVDCVLQ FGGGVHGHPR GTRAGASAVR AAVEAATSGQ
410 420
SFQEVARREK TLEEAIMHWG G
Length:421
Mass (Da):45,345
Last modified:November 24, 2009 - v1
Checksum:i0F22360AF434DC49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001785 Genomic DNA. Translation: ACX52946.1.
RefSeqiWP_015739823.1. NC_013385.1.
YP_003239796.1. NC_013385.1.

Genome annotation databases

EnsemblBacteriaiACX52946; ACX52946; Adeg_1863.
GeneIDi8491867.
KEGGiadg:Adeg_1863.
PATRICi20883310. VBIAmmDeg104956_1863.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001785 Genomic DNA. Translation: ACX52946.1.
RefSeqiWP_015739823.1. NC_013385.1.
YP_003239796.1. NC_013385.1.

3D structure databases

ProteinModelPortaliC9R9G7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi429009.Adeg_1863.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX52946; ACX52946; Adeg_1863.
GeneIDi8491867.
KEGGiadg:Adeg_1863.
PATRICi20883310. VBIAmmDeg104956_1863.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OrthoDBiEOG6ZKXMS.

Enzyme and pathway databases

BioCyciADEG429009:GHG1-1910-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsiTIGR03326. rubisco_III. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 10501 / KC4Imported.

Entry informationi

Entry nameiC9R9G7_AMMDK
AccessioniPrimary (citable) accession number: C9R9G7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: March 4, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.