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C9R5J9

- C9R5J9_AGGAD

UniProt

C9R5J9 - C9R5J9_AGGAD

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Protein
Submitted name: DNA ligase (Polydeoxyribonucleotide synthase)
Gene
D11S_1722
Organism
Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) (Actinobacillus actinomycetemcomitans)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAACT668336:GJBF-1719-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (Polydeoxyribonucleotide synthase)Imported
Gene namesi
Ordered Locus Names:D11S_1722Imported
OrganismiAggregatibacter actinomycetemcomitans serotype C (strain D11S-1) (Actinobacillus actinomycetemcomitans)Imported
Taxonomic identifieri668336 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAggregatibacter
ProteomesiUP000002569: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi668336.D11S_1722.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9R5J9-1 [UniParc]FASTAAdd to Basket

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MSEKLDGVRG YWDGKQMFTR GGVQLSPPTY FLEKFPPFAI DGELFSQRDQ    50
FADISSIVRA YQDKGWHKLK LYVFDVPDAE GNLFARLAQL KTYLAQNPSD 100
YIEIIEQIPI ESPQHIQQFL HQVEQLKGEG IVIRNPNAPY ERKRSSQILK 150
LKTALDEECT VVAHHKGKGQ FESVMGSLTC ENHRGQFKIG SGFKLDDRIN 200
PPPIGAVITY KYRGLTNKGK PRFATFWRTT EQIQIP 236
Length:236
Mass (Da):27,004
Last modified:November 24, 2009 - v1
Checksum:i728B701A999B2F0F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001733 Genomic DNA. Translation: ACX83085.1.
RefSeqiYP_003256304.1. NC_013416.1.

Genome annotation databases

EnsemblBacteriaiACX83085; ACX83085; D11S_1722.
GeneIDi8537441.
KEGGiaat:D11S_1722.
PATRICi31914173. VBIAggAct139153_1618.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001733 Genomic DNA. Translation: ACX83085.1 .
RefSeqi YP_003256304.1. NC_013416.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 668336.D11S_1722.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACX83085 ; ACX83085 ; D11S_1722 .
GeneIDi 8537441.
KEGGi aat:D11S_1722.
PATRICi 31914173. VBIAggAct139153_1618.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci AACT668336:GJBF-1719-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1."
    Chen C., Kittichotirat W., Si Y., Bumgarner R.
    J. Bacteriol. 191:7378-7379(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D11S-1.

Entry informationi

Entry nameiC9R5J9_AGGAD
AccessioniPrimary (citable) accession number: C9R5J9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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