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C9R5J9 (C9R5J9_AGGAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase (Polydeoxyribonucleotide synthase) EMBL ACX83085.1
Gene names
Ordered Locus Names:D11S_1722
OrganismAggregatibacter actinomycetemcomitans serotype C (strain D11S-1) (Actinobacillus actinomycetemcomitans) [Complete proteome] [HAMAP] EMBL ACX83085.1
Taxonomic identifier668336 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Aggregatibacter ›

Protein attributes

Sequence length236 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACX83085.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9R5J9 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 728B701A999B2F0F

FASTA23627,004
        10         20         30         40         50         60 
MSEKLDGVRG YWDGKQMFTR GGVQLSPPTY FLEKFPPFAI DGELFSQRDQ FADISSIVRA 

        70         80         90        100        110        120 
YQDKGWHKLK LYVFDVPDAE GNLFARLAQL KTYLAQNPSD YIEIIEQIPI ESPQHIQQFL 

       130        140        150        160        170        180 
HQVEQLKGEG IVIRNPNAPY ERKRSSQILK LKTALDEECT VVAHHKGKGQ FESVMGSLTC 

       190        200        210        220        230 
ENHRGQFKIG SGFKLDDRIN PPPIGAVITY KYRGLTNKGK PRFATFWRTT EQIQIP

« Hide

References

[1]"Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1."
Chen C., Kittichotirat W., Si Y., Bumgarner R.
J. Bacteriol. 191:7378-7379(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D11S-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001733 Genomic DNA. Translation: ACX83085.1.
RefSeqYP_003256304.1. NC_013416.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING668336.D11S_1722.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX83085; ACX83085; D11S_1722.
GeneID8537441.
KEGGaat:D11S_1722.
PATRIC31914173. VBIAggAct139153_1618.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.

Enzyme and pathway databases

BioCycAACT668336:GJBF-1719-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9R5J9_AGGAD
AccessionPrimary (citable) accession number: C9R5J9
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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