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C9R3J0 (C9R3J0_AGGAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length360 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9R3J0 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: B2C80270650525E0

FASTA36039,273
        10         20         30         40         50         60 
MHMKPATAKI SSVALKHNIQ TIKQKAPESK IIAVVKANAY GHGVVFVSSA VENLVDCFGV 

        70         80         90        100        110        120 
ARLEEALKLR SNGITKPILL LEGFFSAKDL PVLAVNNIQT VVHSQEQLDA LEQAKTPNPI 

       130        140        150        160        170        180 
KVWLKIDTGM HRLGVHLDEV DAFYQKLKSL PCVDPNIGFV SHFSRADELA CGYTEKQLAR 

       190        200        210        220        230        240 
FLQATEGKGG ERSISASGGI LFWQDAHLDW IRPGIIMYGI SPNNTAGKEY GLIPVMNLTS 

       250        260        270        280        290        300 
SLIAVREHKK GEPVGYGGVW MSDKDTKIGV VAIGYGDGYP RDVPEGTPVY LNGRRVPIVG 

       310        320        330        340        350        360 
KVSMDMLTVD LGADSQDKVG DEVILWGKEL PIEEIAAITG VISYELITKL TPRVLTEYID

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References

[1]"Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1."
Chen C., Kittichotirat W., Si Y., Bumgarner R.
J. Bacteriol. 191:7378-7379(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D11S-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001733 Genomic DNA. Translation: ACX82376.1.
RefSeqYP_003255595.1. NC_013416.1.

3D structure databases

ProteinModelPortalC9R3J0.
ModBaseSearch...

Protein-protein interaction databases

STRING668336.D11S_0989.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX82376; ACX82376; D11S_0989.
GeneID8536708.
KEGGaat:D11S_0989.
PATRIC31912742. VBIAggAct139153_0927.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031446.
KOK01775.
OMANFKSIEI.

Enzyme and pathway databases

BioCycAACT668336:GJBF-988-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9R3J0_AGGAD
AccessionPrimary (citable) accession number: C9R3J0
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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