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C9QZK3 (C9QZK3_ECOD1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170
Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170
Gene names
Name:rpiA HAMAP MF_00170 EMBL BAJ44671.1
Ordered Locus Names:EcDH1_0779
ORF Names:ECDH1ME8569_2815 EMBL BAJ44671.1
OrganismEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) [Complete proteome] [HAMAP] EMBL ACX38463.1
Taxonomic identifier536056 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length219 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
C9QZK3 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: B53C49CC3DB188BC

FASTA21922,860
        10         20         30         40         50         60 
MTQDELKKAV GWAALQYVQP GTIVGVGTGS TAAHFIDALG TMKGQIEGAV SSSDASTEKL 

        70         80         90        100        110        120 
KSLGIHVFDL NEVDSLGIYV DGADEINGHM QMIKGGGAAL TREKIIASVA EKFICIADAS 

       130        140        150        160        170        180 
KQVDILGKFP LPVEVIPMAR SAVARQLVKL GGRPEYRQGV VTDNGNVILD VHGMEILDPI 

       190        200        210 
AMENAINAIP GVVTVGLFAN RGADVALIGT PDGVKTIVK

« Hide

References

« Hide 'large scale' references
[1]"Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms."
Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
PLoS ONE 6:e19534-e19534(2011) [PubMed: 21611185] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DH1 EMBL BAJ44671.1.
[2]"Complete sequence of Escherichia coli DH1."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Keasling J.D.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001637 Genomic DNA. Translation: ACX38463.1.
AP012030 Genomic DNA. Translation: BAJ44671.1.

3D structure databases

ProteinModelPortalC9QZK3.
SMRC9QZK3. Positions 2-219.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000197646; EBESCP00000187734; EBESCG00000199936.
GenomeReviewsGene locus EcDH1_0779 in contig CP001637_GR.
PATRIC36693631. VBIEscCol36761_0817.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000011820.
OMAGGDPEYR.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
[Tree]
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERPTHR11934. RpiA. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. RpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC9QZK3_ECOD1
AccessionPrimary (citable) accession number: C9QZK3
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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