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C9QYS9 (C9QYS9_ECOD1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA large subunit methyltransferase G HAMAP-Rule MF_01859
EC=2.1.1.174 HAMAP-Rule MF_01859
Alternative name(s):
23S rRNA m2G1835 methyltransferase HAMAP-Rule MF_01859
rRNA (guanine-N(2)-)-methyltransferase RlmG HAMAP-Rule MF_01859
Gene names
Name:rlmG HAMAP-Rule MF_01859 EMBL BAJ44835.1
Ordered Locus Names:EcDH1_0617, ECDH1ME8569_2979 EMBL BAJ44835.1
OrganismEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) [Complete proteome] [HAMAP] EMBL ACX38304.1
Taxonomic identifier536056 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA By similarity. HAMAP-Rule MF_01859

Catalytic activity

S-adenosyl-L-methionine + guanine(1835) in 23S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1835) in 23S rRNA. HAMAP-Rule MF_01859 SAAS SAAS007848

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01859 SAAS SAAS007848.

Sequence similarities

Belongs to the methyltransferase superfamily. RlmG family. HAMAP-Rule MF_01859

Sequences

Sequence LengthMass (Da)Tools
C9QYS9 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 0496E8BBD36FFB2C

FASTA37842,331
        10         20         30         40         50         60 
MSHLDNGFRS LTLQRFPATD DVNPLQAWEA ADEYLLQQLD DTEIRGPVLI LNDAFGALSC 

        70         80         90        100        110        120 
ALAEHKPYSI GDSYISELAT RENLRLNGID ESSVKFLDST ADYPQQPGVV LIKVPKTLAL 

       130        140        150        160        170        180 
LEQQLRALRK VVTSDTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFNE 

       190        200        210        220        230        240 
PQLADAPQTV SWKLEGTDWT IHNHANVFSR TGLDIGARFF MQHLPENLEG EIVDLGCGNG 

       250        260        270        280        290        300 
VIGLTLLDKN PQAKVVFVDE SPMAVASSRL NVETNMPEAL DRCEFMINNA LSGVEPFRFN 

       310        320        330        340        350        360 
AVLCNPPFHQ QHALTDNVAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCTTI 

       370 
ATNNKFVVLK AVKLGRRR

« Hide

References

[1]"Complete sequence of Escherichia coli DH1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Keasling J.D.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1.
[2]"Comparison of sequence reads obtained from three next-generation sequencing platforms."
Suzuki S., Ono N., Furusawa C., Ying B.W., Yomo T.
PLoS ONE 6:E19534-E19534(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1 and DH1 EMBL BAJ44835.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001637 Genomic DNA. Translation: ACX38304.1.
AP012030 Genomic DNA. Translation: BAJ44835.1.
RefSeqYP_006090593.1. NC_017625.1.
YP_006130380.1. NC_017638.1.

3D structure databases

SMRC9QYS9. Positions 9-374.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX38304; ACX38304; EcDH1_0617.
BAJ44835; BAJ44835; ECDH1ME8569_2979.
GeneID12704186.
12870684.
KEGGedh:EcDH1_0617.
edj:ECDH1ME8569_2979.
PATRIC36693281. VBIEscCol36761_0645.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000246323.
KOK11391.
OMANRHLGYH.

Family and domain databases

HAMAPMF_01859. 23SrRNA_methyltr_G.
InterProIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamPF05175. MTS. 1 hit.
[Graphical view]
PIRSFPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
PROSITEPS00092. N6_MTASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9QYS9_ECOD1
AccessionPrimary (citable) accession number: C9QYS9
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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