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C9QX50

- C9QX50_ECOD1

UniProt

C9QX50 - C9QX50_ECOD1

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

puuE

Organism
Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Submitted name:
    4-aminobutyrate transaminaseImported
    Gene namesi
    Name:puuEImported
    Ordered Locus Names:EcDH1_2344Imported, ECDH1ME8569_1244Imported
    OrganismiEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)Imported
    Taxonomic identifieri536056 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000002619: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliC9QX50.
    SMRiC9QX50. Positions 2-421.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiMCGFYAE.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9QX50-1 [UniParc]FASTAAdd to Basket

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    MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA    50
    VLNTGHRHPD LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG 100
    QAKTAFFTTG AEAVENAVKI ARAHTGRPGV IAFSGGFHGR TYMTMALTGK 150
    VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ DSLDAIERLF KSDIEAKQVA 200
    AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV QSGFARTGKL 250
    FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN 300
    PLAVAAAHAV LNIIDKESLC ERANQLGQRL KNTLIDAKES VPAIAAVRGL 350
    GSMIAVEFND PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP 400
    LTIPDAQFDA AMKILQDALS D 421
    Length:421
    Mass (Da):44,729
    Last modified:November 24, 2009 - v1
    Checksum:iA2C17A885FEBE4EB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39987.1.
    AP012030 Genomic DNA. Translation: BAJ43100.1.
    RefSeqiYP_006092276.1. NC_017625.1.
    YP_006128645.1. NC_017638.1.

    Genome annotation databases

    EnsemblBacteriaiACX39987; ACX39987; EcDH1_2344.
    BAJ43100; BAJ43100; ECDH1ME8569_1244.
    GeneIDi12705947.
    12874118.
    KEGGiedh:EcDH1_2344.
    edj:ECDH1ME8569_1244.
    PATRICi36696998. VBIEscCol36761_2466.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39987.1 .
    AP012030 Genomic DNA. Translation: BAJ43100.1 .
    RefSeqi YP_006092276.1. NC_017625.1.
    YP_006128645.1. NC_017638.1.

    3D structure databases

    ProteinModelPortali C9QX50.
    SMRi C9QX50. Positions 2-421.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACX39987 ; ACX39987 ; EcDH1_2344 .
    BAJ43100 ; BAJ43100 ; ECDH1ME8569_1244 .
    GeneIDi 12705947.
    12874118.
    KEGGi edh:EcDH1_2344.
    edj:ECDH1ME8569_1244.
    PATRICi 36696998. VBIEscCol36761_2466.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi MCGFYAE.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1Imported and DH1Imported.
    2. "Comparison of sequence reads obtained from three next-generation sequencing platforms."
      Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
      PLoS ONE 6:E19534-E19534(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DH1Imported.

    Entry informationi

    Entry nameiC9QX50_ECOD1
    AccessioniPrimary (citable) accession number: C9QX50
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3