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C9QUT7

- C9QUT7_ECOD1

UniProt

C9QUT7 - C9QUT7_ECOD1

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:EcDH1_1994Imported, ECDH1ME8569_1590Imported
    OrganismiEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)Imported
    Taxonomic identifieri536056 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000002619: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020 PotentialImportedAdd
    BLAST
    Chaini21 – 173153 PotentialImportedPRO_5000524148Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliC9QUT7.
    SMRiC9QUT7. Positions 20-173.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000263449.
    KOiK04565.
    OMAiDHPKPLG.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C9QUT7-1 [UniParc]FASTAAdd to Basket

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    MKRFSLAILA LVVATGAQAA SEKVEMNLVT SQGVGQSIGS VTITETDKGL    50
    EFSPDLKALP PGEHGFHIHA KGSCQPATKD GKASAAESAG GHLDPQNTGK 100
    HEGPEGAGHL GDLPALVVNN DGKATDAVIA PRLKSLDEIK DKALMVHVGG 150
    DNMSDQPKPL GGGGERYACG VIK 173
    Length:173
    Mass (Da):17,681
    Last modified:November 24, 2009 - v1
    Checksum:i9A0CB65F03AAB197
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39651.1.
    AP012030 Genomic DNA. Translation: BAJ43446.1.
    RefSeqiYP_006091940.1. NC_017625.1.
    YP_006128991.1. NC_017638.1.

    Genome annotation databases

    EnsemblBacteriaiACX39651; ACX39651; EcDH1_1994.
    BAJ43446; BAJ43446; ECDH1ME8569_1590.
    GeneIDi12705597.
    12873009.
    KEGGiedh:EcDH1_1994.
    edj:ECDH1ME8569_1590.
    PATRICi36696282. VBIEscCol36761_2108.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39651.1 .
    AP012030 Genomic DNA. Translation: BAJ43446.1 .
    RefSeqi YP_006091940.1. NC_017625.1.
    YP_006128991.1. NC_017638.1.

    3D structure databases

    ProteinModelPortali C9QUT7.
    SMRi C9QUT7. Positions 20-173.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACX39651 ; ACX39651 ; EcDH1_1994 .
    BAJ43446 ; BAJ43446 ; ECDH1ME8569_1590 .
    GeneIDi 12705597.
    12873009.
    KEGGi edh:EcDH1_1994.
    edj:ECDH1ME8569_1590.
    PATRICi 36696282. VBIEscCol36761_2108.

    Phylogenomic databases

    HOGENOMi HOG000263449.
    KOi K04565.
    OMAi DHPKPLG.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1Imported and DH1Imported.
    2. "Comparison of sequence reads obtained from three next-generation sequencing platforms."
      Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
      PLoS ONE 6:E19534-E19534(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DH1Imported.

    Entry informationi

    Entry nameiC9QUT7_ECOD1
    AccessioniPrimary (citable) accession number: C9QUT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3