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C9QS30 (C9QS30_ECOD1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Carbonic anhydrase RuleBase RU003956

EC=4.2.1.1 RuleBase RU003956
Gene names
Name:can EMBL BAJ41976.1
Ordered Locus Names:EcDH1_3476
ORF Names:ECDH1ME8569_0120 EMBL BAJ41976.1
OrganismEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) [Complete proteome] [HAMAP] EMBL ACX41091.1
Taxonomic identifier536056 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length220 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

H2CO3 = CO2 + H2O. RuleBase RU003956

Sequence similarities

Belongs to the beta-class carbonic anhydrase family. RuleBase RU003956

Ontologies

Keywords
   LigandZinc RuleBase RU003956
   Molecular functionLyase RuleBase RU003956 EMBL ACX41091.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbon utilization

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbonate dehydratase activity

Inferred from electronic annotation. Source: EC

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9QS30 [UniParc].

Last modified November 24, 2009. Version 1.
Checksum: 48A9086BE9428452

FASTA22025,097
        10         20         30         40         50         60 
MKDIDTLISN NALWSKMLVE EDPGFFEKLA QAQKPRFLWI GCSDSRVPAE RLTGLEPGEL 

        70         80         90        100        110        120 
FVHRNVANLV IHTDLNCLSV VQYAVDVLEV EHIIICGHYG CGGVQAAVEN PELGLINNWL 

       130        140        150        160        170        180 
LHIRDIWFKH SSLLGEMPQE RRLDTLCELN VMEQVYNLGH STIMQSAWKR GQKVTIHGWA 

       190        200        210        220 
YGIHDGLLRD LDVTATNRET LEQRYRHGIS NLKLKHANHK 

« Hide

References

« Hide 'large scale' references
[1]"Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms."
Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
PLoS ONE 6:e19534-e19534(2011) [PubMed: 21611185] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DH1 EMBL BAJ41976.1.
[2]"Complete sequence of Escherichia coli DH1."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Keasling J.D.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001637 Genomic DNA. Translation: ACX41091.1.
AP012030 Genomic DNA. Translation: BAJ41976.1.

3D structure databases

ProteinModelPortalC9QS30.
SMRC9QS30. Positions 2-215.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000197048; EBESCP00000185185; EBESCG00000197501.
GenomeReviewsGene locus EcDH1_3476 in contig CP001637_GR.
PATRIC36699473. VBIEscCol36761_3673.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000009995.
OMACEINVVE.

Family and domain databases

InterProIPR001765. Carbonic_anhydrase.
IPR015892. Carbonic_anhydrase_CS.
[Graphical view]
Gene3DG3DSA:3.40.1050.10. CO_anhd_prok_pln. 1 hit.
PANTHERPTHR11002. Carbonic_anhydrase. 1 hit.
PfamPF00484. Pro_CA. 1 hit.
[Graphical view]
SMARTSM00947. Pro_CA. 1 hit.
[Graphical view]
SUPFAMSSF53056. Prok_plnt_COanhd. 1 hit.
PROSITEPS00704. PROK_CO2_ANHYDRASE_1. 1 hit.
PS00705. PROK_CO2_ANHYDRASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC9QS30_ECOD1
AccessionPrimary (citable) accession number: C9QS30
Entry history
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)