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C9QR17

- C9QR17_ECOD1

UniProt

C9QR17 - C9QR17_ECOD1

Protein
Submitted name:

Aminotransferase class I and II

Gene

yfbQ

Organism
Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Aminotransferase class I and IIImported
    Submitted name:
    Aspartate/tyrosine/aromatic aminotransferaseImported
    Gene namesi
    Name:yfbQImported
    Ordered Locus Names:EcDH1_1366Imported, ECDH1ME8569_2227Imported
    OrganismiEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)Imported
    Taxonomic identifieri536056 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000002619: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliC9QR17.
    SMRiC9QR17. Positions 7-399.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000223042.
    KOiK14260.
    OMAiYQARDMR.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C9QR17-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA    50
    PDEILVDVIR NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI 100
    GNGVSELIVQ AMQALLNSGD EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE 150
    SSDWFPDLDD IRAKITPRTR GIVIINPNNP TGAVYSKELL MEIVEIARQH 200
    NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK TYRVAGFRQG 250
    WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI 300
    TPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPKIDA KRFNIHDDQK 350
    MVLDFLLQEK VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS 400
    GYHQL 405
    Length:405
    Mass (Da):45,517
    Last modified:November 24, 2009 - v1
    Checksum:i6A5E78876CC3C388
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39038.1.
    AP012030 Genomic DNA. Translation: BAJ44083.1.
    RefSeqiYP_006091327.1. NC_017625.1.
    YP_006129628.1. NC_017638.1.

    Genome annotation databases

    EnsemblBacteriaiACX39038; ACX39038; EcDH1_1366.
    BAJ44083; BAJ44083; ECDH1ME8569_2227.
    GeneIDi12704958.
    12874025.
    KEGGiedh:EcDH1_1366.
    edj:ECDH1ME8569_2227.
    PATRICi36694912. VBIEscCol36761_1436.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001637 Genomic DNA. Translation: ACX39038.1 .
    AP012030 Genomic DNA. Translation: BAJ44083.1 .
    RefSeqi YP_006091327.1. NC_017625.1.
    YP_006129628.1. NC_017638.1.

    3D structure databases

    ProteinModelPortali C9QR17.
    SMRi C9QR17. Positions 7-399.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACX39038 ; ACX39038 ; EcDH1_1366 .
    BAJ44083 ; BAJ44083 ; ECDH1ME8569_2227 .
    GeneIDi 12704958.
    12874025.
    KEGGi edh:EcDH1_1366.
    edj:ECDH1ME8569_2227.
    PATRICi 36694912. VBIEscCol36761_1436.

    Phylogenomic databases

    HOGENOMi HOG000223042.
    KOi K14260.
    OMAi YQARDMR.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1Imported and DH1Imported.
    2. "Comparison of sequence reads obtained from three next-generation sequencing platforms."
      Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
      PLoS ONE 6:E19534-E19534(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DH1Imported.

    Entry informationi

    Entry nameiC9QR17_ECOD1
    AccessioniPrimary (citable) accession number: C9QR17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3