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Protein
Submitted name:

Aminotransferase class I and II

Gene

yfbQ

Organism
Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Aminotransferase class I and IIImported
Submitted name:
Aspartate/tyrosine/aromatic aminotransferaseImported
Gene namesi
Name:yfbQImported
Ordered Locus Names:EcDH1_1366Imported, ECDH1ME8569_2227Imported
OrganismiEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)Imported
Taxonomic identifieri536056 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000002619: Chromosome, UP000004998: Chromosome

Structurei

3D structure databases

ProteinModelPortaliC9QR17.
SMRiC9QR17. Positions 1-404.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

C9QR17-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSPIEKSSKL ENVCYDIRGP VLKEAKRLEE EGNKVLKLNI GNPAPFGFDA
60 70 80 90 100
PDEILVDVIR NLPTAQGYCD SKGLYSARKA IMQHYQARGM RDVTVEDIYI
110 120 130 140 150
GNGVSELIVQ AMQALLNSGD EMLVPAPDYP LWTAAVSLSS GKAVHYLCDE
160 170 180 190 200
SSDWFPDLDD IRAKITPRTR GIVIINPNNP TGAVYSKELL MEIVEIARQH
210 220 230 240 250
NLIIFADEIY DKILYDDAEH HSIAPLAPDL LTITFNGLSK TYRVAGFRQG
260 270 280 290 300
WMVLNGPKKH AKGYIEGLEM LASMRLCANV PAQHAIQTAL GGYQSISEFI
310 320 330 340 350
TPGGRLYEQR NRAWELINDI PGVSCVKPRG ALYMFPKIDA KRFNIHDDQK
360 370 380 390 400
MVLDFLLQEK VLLVQGTAFN WPWPDHFRIV TLPRVDDIEL SLSKFARFLS

GYHQL
Length:405
Mass (Da):45,517
Last modified:November 24, 2009 - v1
Checksum:i6A5E78876CC3C388
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001637 Genomic DNA. Translation: ACX39038.1.
AP012030 Genomic DNA. Translation: BAJ44083.1.
RefSeqiYP_006091327.1. NC_017625.1.
YP_006129628.1. NC_017638.1.

Genome annotation databases

EnsemblBacteriaiACX39038; ACX39038; EcDH1_1366.
BAJ44083; BAJ44083; ECDH1ME8569_2227.
GeneIDi12704958.
12874025.
KEGGiedh:EcDH1_1366.
edj:ECDH1ME8569_2227.
PATRICi36694912. VBIEscCol36761_1436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001637 Genomic DNA. Translation: ACX39038.1.
AP012030 Genomic DNA. Translation: BAJ44083.1.
RefSeqiYP_006091327.1. NC_017625.1.
YP_006129628.1. NC_017638.1.

3D structure databases

ProteinModelPortaliC9QR17.
SMRiC9QR17. Positions 1-404.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX39038; ACX39038; EcDH1_1366.
BAJ44083; BAJ44083; ECDH1ME8569_2227.
GeneIDi12704958.
12874025.
KEGGiedh:EcDH1_1366.
edj:ECDH1ME8569_2227.
PATRICi36694912. VBIEscCol36761_1436.

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1Imported and DH1Imported.
  2. "Comparison of sequence reads obtained from three next-generation sequencing platforms."
    Suzuki S., Ono N., Furusawa C., Ying B.-W., Yomo T.
    PLoS ONE 6:E19534-E19534(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DH1Imported.

Entry informationi

Entry nameiC9QR17_ECOD1
AccessioniPrimary (citable) accession number: C9QR17
Entry historyi
Integrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.