C9LTC7 (C9LTC7_SELS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
ORF Names:	Selsp_1492 EMBL AEC00449.1, SELSPUOL_00710 EMBL EEX77973.1

Organism

Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) [Complete proteome] [HAMAP] EMBL EEX77973.1

Taxonomic identifier

546271 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Negativicutes › Selenomonadales › Veillonellaceae › Selenomonas › Selenomonas sputigena

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding RuleBase RU000323 HAMAP-Rule MF_00118 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325 HAMAP-Rule MF_00118 EMBL EEX77973.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	81 – 85	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	136 – 139	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	C9LTC7 [UniParc]. Last modified November 24, 2009. Version 1. Checksum: 9437545888BA9615	FASTA	395	43,616
	10 20 30 40 50 60 MAKQKFERNK PHVNIGTIGH VDHGKTTLTA AITKVLSKKG MAQFEDYADI DKAPEERERG 70 80 90 100 110 120 ITINTAHVEY ETEKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 130 140 150 160 170 180 LLARQVGVPA IVVFLNKVDQ VDDPELLELV EMEVRDLLTA YEFPGDDIPV IAGSALKALE 190 200 210 220 230 240 DDAEQEKKIL ELMDAVDEYI PTPTRDTEKP FLMPVEDVFT ITGRGTVATG RVERGELKLN 250 260 270 280 290 300 DTVEIVGLED ETKSTVVTGI EMFRKMLDTA VAGDNIGALL RGVDRKDIVR GQVLAKPGSI 310 320 330 340 350 360 NPHTKFKAQV YVLKKEEGGR HTPFFTNYRP QFYFRTTDVT GVVRLPEGTE MVMPGDNVEM 370 380 390 EVELITPIAI EKGLRFAIRE GGHTVGAGRV TEIEG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L., Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C., Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S. , Wollam A., Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A., Mardis E.R., Wilson R.K. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 35185 EMBL EEX77973.1.
[2]	"The complete genome of Selenomonas sputigena DSM 20758." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Schneider S., Klenk H.-P., Eisen J.A. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35185 EMBL AEC00449.1 and ATCC 35185 / DSM 20758 / VPI D19B-28.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002637 Genomic DNA. Translation: AEC00449.1. ACKP02000012 Genomic DNA. Translation: EEX77973.1.
RefSeq	YP_004413908.1. NC_015437.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEC00449; AEC00449; Selsp_1492. EEX77973; EEX77973; SELSPUOL_00710.
GeneID	10497725.
KEGG	ssg:Selsp_1492.
PATRIC	25825529. VBISelSpu76100_0378.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02358.
Family and domain databases
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C9LTC7_SELS3

Accession

Primary (citable) accession number: C9LTC7

Entry history

Integrated into UniProtKB/TrEMBL:	November 24, 2009
Last sequence update:	November 24, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)