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C9JY79

- C9JY79_HUMAN

UniProt

C9JY79 - C9JY79_HUMAN

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Protein
Submitted name: Spectrin beta chain, non-erythrocytic 4
Gene
SPTBN4
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. phospholipid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Spectrin beta chain, non-erythrocytic 4Imported
Gene namesi
Name:SPTBN4Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:14896. SPTBN4.

PTM / Processingi

Proteomic databases

PRIDEiC9JY79.

Expressioni

Gene expression databases

ArrayExpressiC9JY79.
BgeeiC9JY79.

Structurei

3D structure databases

ProteinModelPortaliC9JY79.
SMRiC9JY79. Positions 42-857, 1165-1268.

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotations

Phylogenomic databases

HOGENOMiHOG000170092.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR001605. PH_dom-spectrin-type.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR018159. Spectrin/alpha-actinin.
IPR002017. Spectrin_repeat.
[Graphical view]
PfamiPF00435. Spectrin. 8 hits.
[Graphical view]
PRINTSiPR00683. SPECTRINPH.
SMARTiSM00233. PH. 1 hit.
SM00150. SPEC. 8 hits.
[Graphical view]
PROSITEiPS50003. PH_DOMAIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9JY79-1 [UniParc]FASTAAdd to Basket

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MPHYPSCSSA PSLGTPRPPQ IQQLEARHRN QENQLRAQQW MQKLHDQLEL     50
QHFLRDCHEL DGWIHEKMLM ARDGTREDNH KLHKRWLRHQ AFMAELAQNK 100
EWLEKIEREG QQLMQEKPEL AASVRKKLGE IRQCWAELES TTQAKARQLF 150
EASKADQLVQ SFAELDKKLL HMESQLQDVD PGGDLATVNS QLKKLQSMES 200
QVEEWYREVG ELQAQTAALP LEPASKELVG ERQNAVGERL VRLLEPLQER 250
RRLLLASKEL HQVAHDLDDE LAWVQERLPL AMQTERGNGL QAVQQHIKKN 300
QGLRREIQAH GPRLEEVLER AGALASLRSP EAEAVRRGLE QLQSAWAGLR 350
EAAERRQQVL DAAFQVEQYY FDVAEVEAWL GEQELLMMSE DKGKDEQSTL 400
QLLKKHLQLE QGVENYEESI AQLSRQCRAL LEMGHPDSEQ ISRRQSQVDR 450
LYVALKELGE ERRVALEQQY WLYQLSRQVS ELEHWIAEKE VVAGSPELGQ 500
DFEHVSVLQE KFSEFASETG MAGRERLAAV NQMVDELIEC GHTAAATMAE 550
WKDGLNEAWA ELLELMGTRA QLLAASRELH KFFSDARELQ GQIEEKRRRL 600
PRLTTPPEPR PSASSMQRTL RAFEHDLQLL VSQVRQLQEG AAQLRTVYAG 650
EHAEAIASRE QEVLQGWKEL LSACEDARLH VSSTADALRF HSQVRDLLSW 700
MDGIASQIGA ADKPRDVSSV EVLMNYHQGL KTELEARVPE LTTCQELGRS 750
LLLNKSAMAD EIQAQLDKLG TRKEEVSEKW DRHWEWLQQM LEVHQFAQEA 800
VVADAWLTAQ EPLLQSRELG SSVDEVEQLI RRHEAFRKAA AAWEERFSSL 850
RRLTTIEKIK AEQSKQPPTP LLGRKFFGDP TELAAKAAPL LRPGGYERGL 900
EPLARRASDT LSAEVRTRVG YVRQELKPER LQPRIDRLPE IPGRVEPAAL 950
PAAPEDAAET PATPAAAEQV RPRPERQESA DRAEELPRRR RPERQESVDQ 1000
SEEAARRRRP ERQESAEHEA AHSLTLGRYE QMERRRERRE RRLERQESSE 1050
QEMPIRGDLV KGKATLADIV EQLQEKEAGP GLPAGPSLPQ PRELPPGRLP 1100
NGLELPERTP RPDRPRARDR PKPRRRPRPR EGGEGGGSRR SRSAPAQGGS 1150
APAPPPPPTH TVQHEGFLLR KRELDANRKS SNRSWVSLYC VLSKGELGFY 1200
KDSKGPASGS THGGEPLLSL HKATSEVASD YKKKKHVFKL QTQDGSEFLL 1250
QAKDEEEMNG WLEAVASSVA EHAEIARWGQ TLPTTSSTDE GNPKREGGDR 1300
RASGRRK 1307
Length:1,307
Mass (Da):148,665
Last modified:November 3, 2009 - v1
Checksum:iED9E8E0A81EB09E2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC020929 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000392025; ENSP00000375879; ENSG00000160460.
UCSCiuc010egx.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC020929 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali C9JY79.
SMRi C9JY79. Positions 42-857, 1165-1268.
ModBasei Search...

Proteomic databases

PRIDEi C9JY79.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000392025 ; ENSP00000375879 ; ENSG00000160460 .
UCSCi uc010egx.3. human.

Organism-specific databases

HGNCi HGNC:14896. SPTBN4.
GenAtlasi Search...

Phylogenomic databases

HOGENOMi HOG000170092.

Miscellaneous databases

GenomeRNAii 57731.
NextBioi 35488286.

Gene expression databases

ArrayExpressi C9JY79.
Bgeei C9JY79.

Family and domain databases

Gene3Di 2.30.29.30. 1 hit.
InterProi IPR001605. PH_dom-spectrin-type.
IPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR018159. Spectrin/alpha-actinin.
IPR002017. Spectrin_repeat.
[Graphical view ]
Pfami PF00435. Spectrin. 8 hits.
[Graphical view ]
PRINTSi PR00683. SPECTRINPH.
SMARTi SM00233. PH. 1 hit.
SM00150. SPEC. 8 hits.
[Graphical view ]
PROSITEi PS50003. PH_DOMAIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiC9JY79_HUMAN
AccessioniPrimary (citable) accession number: C9JY79
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 3, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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