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C9JY79 (C9JY79_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:SPTBN4 Ensembl ENSP00000375879
OrganismHomo sapiens (Human) [Reference proteome] Ensembl ENSP00000375879
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1307 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000375879

Ontologies

Keywords
   DomainRepeat SAAS SAAS002017
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionphospholipid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9JY79 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: ED9E8E0A81EB09E2

FASTA1,307148,665
        10         20         30         40         50         60 
MPHYPSCSSA PSLGTPRPPQ IQQLEARHRN QENQLRAQQW MQKLHDQLEL QHFLRDCHEL 

        70         80         90        100        110        120 
DGWIHEKMLM ARDGTREDNH KLHKRWLRHQ AFMAELAQNK EWLEKIEREG QQLMQEKPEL 

       130        140        150        160        170        180 
AASVRKKLGE IRQCWAELES TTQAKARQLF EASKADQLVQ SFAELDKKLL HMESQLQDVD 

       190        200        210        220        230        240 
PGGDLATVNS QLKKLQSMES QVEEWYREVG ELQAQTAALP LEPASKELVG ERQNAVGERL 

       250        260        270        280        290        300 
VRLLEPLQER RRLLLASKEL HQVAHDLDDE LAWVQERLPL AMQTERGNGL QAVQQHIKKN 

       310        320        330        340        350        360 
QGLRREIQAH GPRLEEVLER AGALASLRSP EAEAVRRGLE QLQSAWAGLR EAAERRQQVL 

       370        380        390        400        410        420 
DAAFQVEQYY FDVAEVEAWL GEQELLMMSE DKGKDEQSTL QLLKKHLQLE QGVENYEESI 

       430        440        450        460        470        480 
AQLSRQCRAL LEMGHPDSEQ ISRRQSQVDR LYVALKELGE ERRVALEQQY WLYQLSRQVS 

       490        500        510        520        530        540 
ELEHWIAEKE VVAGSPELGQ DFEHVSVLQE KFSEFASETG MAGRERLAAV NQMVDELIEC 

       550        560        570        580        590        600 
GHTAAATMAE WKDGLNEAWA ELLELMGTRA QLLAASRELH KFFSDARELQ GQIEEKRRRL 

       610        620        630        640        650        660 
PRLTTPPEPR PSASSMQRTL RAFEHDLQLL VSQVRQLQEG AAQLRTVYAG EHAEAIASRE 

       670        680        690        700        710        720 
QEVLQGWKEL LSACEDARLH VSSTADALRF HSQVRDLLSW MDGIASQIGA ADKPRDVSSV 

       730        740        750        760        770        780 
EVLMNYHQGL KTELEARVPE LTTCQELGRS LLLNKSAMAD EIQAQLDKLG TRKEEVSEKW 

       790        800        810        820        830        840 
DRHWEWLQQM LEVHQFAQEA VVADAWLTAQ EPLLQSRELG SSVDEVEQLI RRHEAFRKAA 

       850        860        870        880        890        900 
AAWEERFSSL RRLTTIEKIK AEQSKQPPTP LLGRKFFGDP TELAAKAAPL LRPGGYERGL 

       910        920        930        940        950        960 
EPLARRASDT LSAEVRTRVG YVRQELKPER LQPRIDRLPE IPGRVEPAAL PAAPEDAAET 

       970        980        990       1000       1010       1020 
PATPAAAEQV RPRPERQESA DRAEELPRRR RPERQESVDQ SEEAARRRRP ERQESAEHEA 

      1030       1040       1050       1060       1070       1080 
AHSLTLGRYE QMERRRERRE RRLERQESSE QEMPIRGDLV KGKATLADIV EQLQEKEAGP 

      1090       1100       1110       1120       1130       1140 
GLPAGPSLPQ PRELPPGRLP NGLELPERTP RPDRPRARDR PKPRRRPRPR EGGEGGGSRR 

      1150       1160       1170       1180       1190       1200 
SRSAPAQGGS APAPPPPPTH TVQHEGFLLR KRELDANRKS SNRSWVSLYC VLSKGELGFY 

      1210       1220       1230       1240       1250       1260 
KDSKGPASGS THGGEPLLSL HKATSEVASD YKKKKHVFKL QTQDGSEFLL QAKDEEEMNG 

      1270       1280       1290       1300 
WLEAVASSVA EHAEIARWGQ TLPTTSSTDE GNPKREGGDR RASGRRK 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and biology of human chromosome 19."
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. expand/collapse author list , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC020929 Genomic DNA. No translation available.
UniGeneHs.32706.

3D structure databases

ProteinModelPortalC9JY79.
SMRC9JY79. Positions 42-857, 1165-1268.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEC9JY79.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000392025; ENSP00000375879; ENSG00000160460.
KEGGhsa:57731.
UCSCuc010egx.3. human.

Organism-specific databases

CTD57731.
HGNCHGNC:14896. SPTBN4.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000170092.
KOK06115.

Gene expression databases

ArrayExpressC9JY79.
BgeeC9JY79.

Family and domain databases

Gene3D2.30.29.30. 1 hit.
InterProIPR001605. PH_dom-spectrin-type.
IPR011993. PH_like_dom.
IPR001849. Pleckstrin_homology.
IPR018159. Spectrin/alpha-actinin.
IPR002017. Spectrin_repeat.
[Graphical view]
PfamPF00435. Spectrin. 8 hits.
[Graphical view]
PRINTSPR00683. SPECTRINPH.
SMARTSM00233. PH. 1 hit.
SM00150. SPEC. 8 hits.
[Graphical view]
PROSITEPS50003. PH_DOMAIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi57731.
NextBio35488286.

Entry information

Entry nameC9JY79_HUMAN
AccessionPrimary (citable) accession number: C9JY79
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.