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C9JY79

- C9JY79_HUMAN

UniProt

C9JY79 - C9JY79_HUMAN

Protein
Submitted name:

Spectrin beta chain, non-erythrocytic 4

Gene

SPTBN4

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (03 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phospholipid binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Spectrin beta chain, non-erythrocytic 4Imported
    Gene namesi
    Name:SPTBN4Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 19

    Organism-specific databases

    HGNCiHGNC:14896. SPTBN4.

    PTM / Processingi

    Proteomic databases

    PRIDEiC9JY79.

    Expressioni

    Gene expression databases

    ArrayExpressiC9JY79.
    BgeeiC9JY79.

    Structurei

    3D structure databases

    ProteinModelPortaliC9JY79.
    SMRiC9JY79. Positions 42-857, 1165-1268.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000170092.

    Family and domain databases

    Gene3Di2.30.29.30. 1 hit.
    InterProiIPR001605. PH_dom-spectrin-type.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR018159. Spectrin/alpha-actinin.
    IPR002017. Spectrin_repeat.
    [Graphical view]
    PfamiPF00435. Spectrin. 8 hits.
    [Graphical view]
    PRINTSiPR00683. SPECTRINPH.
    SMARTiSM00233. PH. 1 hit.
    SM00150. SPEC. 8 hits.
    [Graphical view]
    PROSITEiPS50003. PH_DOMAIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9JY79-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPHYPSCSSA PSLGTPRPPQ IQQLEARHRN QENQLRAQQW MQKLHDQLEL     50
    QHFLRDCHEL DGWIHEKMLM ARDGTREDNH KLHKRWLRHQ AFMAELAQNK 100
    EWLEKIEREG QQLMQEKPEL AASVRKKLGE IRQCWAELES TTQAKARQLF 150
    EASKADQLVQ SFAELDKKLL HMESQLQDVD PGGDLATVNS QLKKLQSMES 200
    QVEEWYREVG ELQAQTAALP LEPASKELVG ERQNAVGERL VRLLEPLQER 250
    RRLLLASKEL HQVAHDLDDE LAWVQERLPL AMQTERGNGL QAVQQHIKKN 300
    QGLRREIQAH GPRLEEVLER AGALASLRSP EAEAVRRGLE QLQSAWAGLR 350
    EAAERRQQVL DAAFQVEQYY FDVAEVEAWL GEQELLMMSE DKGKDEQSTL 400
    QLLKKHLQLE QGVENYEESI AQLSRQCRAL LEMGHPDSEQ ISRRQSQVDR 450
    LYVALKELGE ERRVALEQQY WLYQLSRQVS ELEHWIAEKE VVAGSPELGQ 500
    DFEHVSVLQE KFSEFASETG MAGRERLAAV NQMVDELIEC GHTAAATMAE 550
    WKDGLNEAWA ELLELMGTRA QLLAASRELH KFFSDARELQ GQIEEKRRRL 600
    PRLTTPPEPR PSASSMQRTL RAFEHDLQLL VSQVRQLQEG AAQLRTVYAG 650
    EHAEAIASRE QEVLQGWKEL LSACEDARLH VSSTADALRF HSQVRDLLSW 700
    MDGIASQIGA ADKPRDVSSV EVLMNYHQGL KTELEARVPE LTTCQELGRS 750
    LLLNKSAMAD EIQAQLDKLG TRKEEVSEKW DRHWEWLQQM LEVHQFAQEA 800
    VVADAWLTAQ EPLLQSRELG SSVDEVEQLI RRHEAFRKAA AAWEERFSSL 850
    RRLTTIEKIK AEQSKQPPTP LLGRKFFGDP TELAAKAAPL LRPGGYERGL 900
    EPLARRASDT LSAEVRTRVG YVRQELKPER LQPRIDRLPE IPGRVEPAAL 950
    PAAPEDAAET PATPAAAEQV RPRPERQESA DRAEELPRRR RPERQESVDQ 1000
    SEEAARRRRP ERQESAEHEA AHSLTLGRYE QMERRRERRE RRLERQESSE 1050
    QEMPIRGDLV KGKATLADIV EQLQEKEAGP GLPAGPSLPQ PRELPPGRLP 1100
    NGLELPERTP RPDRPRARDR PKPRRRPRPR EGGEGGGSRR SRSAPAQGGS 1150
    APAPPPPPTH TVQHEGFLLR KRELDANRKS SNRSWVSLYC VLSKGELGFY 1200
    KDSKGPASGS THGGEPLLSL HKATSEVASD YKKKKHVFKL QTQDGSEFLL 1250
    QAKDEEEMNG WLEAVASSVA EHAEIARWGQ TLPTTSSTDE GNPKREGGDR 1300
    RASGRRK 1307
    Length:1,307
    Mass (Da):148,665
    Last modified:November 3, 2009 - v1
    Checksum:iED9E8E0A81EB09E2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC020929 Genomic DNA. No translation available.
    KF511269 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000392025; ENSP00000375879; ENSG00000160460.
    UCSCiuc010egx.3. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC020929 Genomic DNA. No translation available.
    KF511269 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali C9JY79.
    SMRi C9JY79. Positions 42-857, 1165-1268.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi C9JY79.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000392025 ; ENSP00000375879 ; ENSG00000160460 .
    UCSCi uc010egx.3. human.

    Organism-specific databases

    HGNCi HGNC:14896. SPTBN4.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000170092.

    Miscellaneous databases

    NextBioi 35488286.

    Gene expression databases

    ArrayExpressi C9JY79.
    Bgeei C9JY79.

    Family and domain databases

    Gene3Di 2.30.29.30. 1 hit.
    InterProi IPR001605. PH_dom-spectrin-type.
    IPR001849. PH_domain.
    IPR011993. PH_like_dom.
    IPR018159. Spectrin/alpha-actinin.
    IPR002017. Spectrin_repeat.
    [Graphical view ]
    Pfami PF00435. Spectrin. 8 hits.
    [Graphical view ]
    PRINTSi PR00683. SPECTRINPH.
    SMARTi SM00233. PH. 1 hit.
    SM00150. SPEC. 8 hits.
    [Graphical view ]
    PROSITEi PS50003. PH_DOMAIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and biology of human chromosome 19."
      Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
      , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
      Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiC9JY79_HUMAN
    AccessioniPrimary (citable) accession number: C9JY79
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 3, 2009
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3