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C9JXU1

- C9JXU1_HUMAN

UniProt

C9JXU1 - C9JXU1_HUMAN

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Protein
Submitted name:

Protein Shroom1

Gene

SHROOM1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. actin filament bundle assembly Source: Ensembl
  2. cell morphogenesis Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Shroom1Imported
Gene namesi
Name:SHROOM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 5

Organism-specific databases

HGNCiHGNC:24084. SHROOM1.

Subcellular locationi

GO - Cellular componenti

  1. myosin II complex Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiC9JXU1.
ExpressionAtlasiC9JXU1. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliC9JXU1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063061.
HOGENOMiHOG000293372.

Family and domain databases

InterProiIPR014800. ASD1.
IPR027685. Shroom_fam.
[Graphical view]
PANTHERiPTHR15012. PTHR15012. 1 hit.
PfamiPF08688. ASD1. 1 hit.
[Graphical view]
PROSITEiPS51306. ASD1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C9JXU1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEALGPGGDR ASPASSTSSL DLWHLSMRAD SAYSSFSAAS GGPEPRTQSP
60 70 80 90 100
GTDLLPYLDW DYVRVVWGGP GPAPPDAALC TSPRPRPAVA ARSGPQPTEV
110 120 130 140 150
PGTPGPLNRQ ATPLLYALAA EAEAAAQAAE PPSPPASRAA YRQRLQGAQR
160 170 180 190 200
RVLRETSFQR KELRMSLPAR LRPTVPARPP ATHPRSASLS HPGGEGEPAR
210 220 230 240 250
SRAPAPGTAG RGPLANQQRK WCFSEPGKLD RVGRGGGPAR ECLGEACSSS
260 270 280 290 300
GLPGPEPLEF QHPALAKFED HEVGWLPETQ PQGSMNLDSG SLKLGDAFRP
310 320
ASRSRSASGE VLGSWGGSGG TIPI
Length:324
Mass (Da):33,813
Last modified:November 3, 2009 - v1
Checksum:iD4BCD65B375C2A36
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei324 – 3241Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004500 Genomic DNA. No translation available.
AC004775 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000440118; ENSP00000388049; ENSG00000164403.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004500 Genomic DNA. No translation available.
AC004775 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali C9JXU1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000440118 ; ENSP00000388049 ; ENSG00000164403 .

Organism-specific databases

HGNCi HGNC:24084. SHROOM1.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00530000063061.
HOGENOMi HOG000293372.

Miscellaneous databases

NextBioi 35488231.

Gene expression databases

Bgeei C9JXU1.
ExpressionAtlasi C9JXU1. baseline and differential.

Family and domain databases

InterProi IPR014800. ASD1.
IPR027685. Shroom_fam.
[Graphical view ]
PANTHERi PTHR15012. PTHR15012. 1 hit.
Pfami PF08688. ASD1. 1 hit.
[Graphical view ]
PROSITEi PS51306. ASD1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and comparative analysis of human chromosome 5."
    Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.
    , Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C., Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M., Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M., Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S., Richardson P., Lucas S.M., Myers R.M., Rubin E.M.
    Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiC9JXU1_HUMAN
AccessioniPrimary (citable) accession number: C9JXU1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 29, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3