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C9JXU1

- C9JXU1_HUMAN

UniProt

C9JXU1 - C9JXU1_HUMAN

Protein
Submitted name:

Protein Shroom1

Gene

SHROOM1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (03 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. actin filament bundle assembly Source: Ensembl
    2. cell morphogenesis Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Shroom1Imported
    Gene namesi
    Name:SHROOM1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 5

    Organism-specific databases

    HGNCiHGNC:24084. SHROOM1.

    Subcellular locationi

    GO - Cellular componenti

    1. myosin II complex Source: Ensembl

    Expressioni

    Gene expression databases

    ArrayExpressiC9JXU1.
    BgeeiC9JXU1.

    Structurei

    3D structure databases

    ProteinModelPortaliC9JXU1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000293372.

    Family and domain databases

    InterProiIPR014800. ASD1.
    IPR027685. Shroom_fam.
    [Graphical view]
    PANTHERiPTHR15012. PTHR15012. 1 hit.
    PfamiPF08688. ASD1. 1 hit.
    [Graphical view]
    PROSITEiPS51306. ASD1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    C9JXU1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEALGPGGDR ASPASSTSSL DLWHLSMRAD SAYSSFSAAS GGPEPRTQSP    50
    GTDLLPYLDW DYVRVVWGGP GPAPPDAALC TSPRPRPAVA ARSGPQPTEV 100
    PGTPGPLNRQ ATPLLYALAA EAEAAAQAAE PPSPPASRAA YRQRLQGAQR 150
    RVLRETSFQR KELRMSLPAR LRPTVPARPP ATHPRSASLS HPGGEGEPAR 200
    SRAPAPGTAG RGPLANQQRK WCFSEPGKLD RVGRGGGPAR ECLGEACSSS 250
    GLPGPEPLEF QHPALAKFED HEVGWLPETQ PQGSMNLDSG SLKLGDAFRP 300
    ASRSRSASGE VLGSWGGSGG TIPI 324
    Length:324
    Mass (Da):33,813
    Last modified:November 3, 2009 - v1
    Checksum:iD4BCD65B375C2A36
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei324 – 3241Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC004500 Genomic DNA. No translation available.
    AC004775 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000440118; ENSP00000388049; ENSG00000164403.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC004500 Genomic DNA. No translation available.
    AC004775 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali C9JXU1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000440118 ; ENSP00000388049 ; ENSG00000164403 .

    Organism-specific databases

    HGNCi HGNC:24084. SHROOM1.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000293372.

    Miscellaneous databases

    NextBioi 35488231.

    Gene expression databases

    ArrayExpressi C9JXU1.
    Bgeei C9JXU1.

    Family and domain databases

    InterProi IPR014800. ASD1.
    IPR027685. Shroom_fam.
    [Graphical view ]
    PANTHERi PTHR15012. PTHR15012. 1 hit.
    Pfami PF08688. ASD1. 1 hit.
    [Graphical view ]
    PROSITEi PS51306. ASD1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and comparative analysis of human chromosome 5."
      Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.
      , Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C., Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M., Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M., Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S., Richardson P., Lucas S.M., Myers R.M., Rubin E.M.
      Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
      Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
    5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiC9JXU1_HUMAN
    AccessioniPrimary (citable) accession number: C9JXU1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 3, 2009
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3