C9JX71 (C9JX71_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Apolipoprotein D Ensembl ENSP00000393076

Gene names

Name:

APOD Ensembl ENSP00000393076

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000393076

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	149 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000393076

Ontologies

Keywords
Cellular component	Secreted SAAS SAAS012674
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	negative regulation of lipoprotein lipid oxidation Inferred from electronic annotation. Source: Compara response to reactive oxygen species Inferred from electronic annotation. Source: Compara
Cellular_component	extracellular region Inferred from electronic annotation. Source: UniProtKB-KW intracellular Inferred from electronic annotation. Source: Compara
Molecular_function	lipid binding Inferred from electronic annotation. Source: InterPro transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	149	1	Ensembl ENSP00000393076

Sequences

	Sequence		Length	Mass (Da)
	C9JX71 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: F5C6097D9E14D762	FASTA	149	16,885
	10 20 30 40 50 60 MVMLLLLLSA LAGLFGAAEG QAFHLGKCPN PPVQENFDVN KYLGRWYEIE KIPTTFENGR 70 80 90 100 110 120 CIQANYSLME NGKIKVLNQE LRADGTVNQI EGEATPVNLT EPAKLEVKFS WFMPSAPYWI 130 140 LATDYENYAL VYSCTCIIQL FHVDFAWIL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence, annotation and analysis of human chromosome 3." Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J. , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A. Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC069213 Genomic DNA. No translation available.
IPI	IPI00927914.
3D structure databases
ProteinModelPortal	C9JX71.
SMR	C9JX71. Positions 23-149.
ModBase	Search...
Protein-protein interaction databases
STRING	C9JX71.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000453131; ENSP00000393076; ENSG00000189058.
Organism-specific databases
HGNC	HGNC:612. APOD.
GenAtlas	Search...
Phylogenomic databases
HOGENOM	HOG000061525.
Gene expression databases
ArrayExpress	C9JX71.
Bgee	C9JX71.
Family and domain databases
Gene3D	2.40.128.20. 1 hit.
InterPro	IPR026222. ApoD_vertbrte. IPR002969. ApolipopD. IPR012674. Calycin. IPR011038. Calycin-like. IPR022271. Lipocalin_ApoD. IPR022272. Lipocalin_CS. IPR000566. Lipocln_cytosolic_FA-bd_dom. [Graphical view]
Pfam	PF08212. Lipocalin_2. 1 hit. [Graphical view]
PIRSF	PIRSF036893. Lipocalin_ApoD. 1 hit.
PRINTS	PR02058. APODVERTBRTE. PR01219. APOLIPOPROTD.
SUPFAM	SSF50814. Calycin. 1 hit.
PROSITE	PS00213. LIPOCALIN. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	APOD. human.
NextBio	35488163.

Entry information

Entry name

C9JX71_HUMAN

Accession

Primary (citable) accession number: C9JX71

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.