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C9JW18 (C9JW18_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1006 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000391049 Ensembl ENSP00000399349

Sequences

Sequence LengthMass (Da)Tools
C9JW18 [UniParc].

Last modified April 18, 2012. Version 2.
Checksum: 430FD72EAB983984

FASTA1,006112,705
        10         20         30         40         50         60 
MDSSQQKTFR GHDAPVLSLS FDPKDIFLAS ASCDGSVRVW QISDQTCAIS WPLLQKCNDV 

        70         80         90        100        110        120 
INAKSICRLA WQPKSGKLLA IPVEKSVKLY RRESWSHQFD LSDNFISQTL NIVTWSPCGQ 

       130        140        150        160        170        180 
YLAAGSINGL IIVWNVETKD CMERVKHEKG YAICGLAWHP TCGRISYTDA EGNLGLLENV 

       190        200        210        220        230        240 
CDPSGKTSSS KVSSRVEKDY NDLFDGDDMS NAGDFLNDNA VEIPSFSKGI INDDEDDEDL 

       250        260        270        280        290        300 
MMASGRPRQR SHILEDDENS VDISMLKTGS SLLKEEEEDG QEGSIHNLPL VTSQRPFYDG 

       310        320        330        340        350        360 
PMPTPRQKPF QSGSTPLHLT HRFMVWNSIG IIRCYNDEQD NAIDVEFHDT SIHHATHLSN 

       370        380        390        400        410        420 
TLNYTIADLS HEAILLACES TDELASKLHC LHFSSWDSSK EWIIDLPQNE DIEAICLGQG 

       430        440        450        460        470        480 
WAAAATSALL LRLFTIGGVQ KEVFSLAGPV VSMAGHGEQL FIVYHRGTGF DGDQCLGVQL 

       490        500        510        520        530        540 
LELGKKKKQI LHGDPLPLTR KSYLAWIGFS AEGTPCYVDS EGIVRMLNRG LGNTWTPICN 

       550        560        570        580        590        600 
TREHCKGKSD HYWVVGIHEN PQQLRCIPCK GSRFPPTLPR PAVAILSFKL PYCQIATEKG 

       610        620        630        640        650        660 
QMEEQFWRSV IFHNHLDYLA KNGYEYEEST KNQATKEQQE LLMKMLALSC KLEREFRCVE 

       670        680        690        700        710        720 
LADLMTQNAV NLAIKYASRS RKLILAQKLS ELAVEKAAEL TATQVEEEEE EEDFRKKLNA 

       730        740        750        760        770        780 
GYSNTATEWS QPRFRNQVEE DAEDSGEADD EEKPEIHKPG QNSFSKSTNS SDVSAKSGAV 

       790        800        810        820        830        840 
TFSSQGRVNP FKVSASSKEP AMSMNSARST NILDNMGKSS KKSTALSRTT NNEKSPIIKP 

       850        860        870        880        890        900 
LIPKPKPKQA SAASYFQKRN SQTNKTEEVK EENLKNVLSE TPAICPPQNT ENQRPKTGFQ 

       910        920        930        940        950        960 
MWLEENRSNI LSDNPDFSDE ADIIKEGMIR FRVLSTEERK VWANKAKGET ASEGTEAKKR 

       970        980        990       1000 
KRVVDESDET ENQEEKAKEN LNLSKKQKPL DFSTNQKLSA FAFKQE 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and analysis of human chromosome 14."
Heilig R., Eckenberg R., Petit J.-L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., De Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H. expand/collapse author list , Pepin K., Artiguenave F., Robert C., Cruaud C., Bruels T., Jaillon O., Friedlander L., Samson G., Brottier P., Cure S., Segurens B., Aniere F., Samain S., Crespeau H., Abbasi N., Aiach N., Boscus D., Dickhoff R., Dors M., Dubois I., Friedman C., Gouyvenoux M., James R., Madan A., Mairey-Estrada B., Mangenot S., Martins N., Menard M., Oztas S., Ratcliffe A., Shaffer T., Trask B., Vacherie B., Bellemere C., Belser C., Besnard-Gonnet M., Bartol-Mavel D., Boutard M., Briez-Silla S., Combette S., Dufosse-Laurent V., Ferron C., Lechaplais C., Louesse C., Muselet D., Magdelenat G., Pateau E., Petit E., Sirvain-Trukniewicz P., Trybou A., Vega-Czarny N., Bataille E., Bluet E., Bordelais I., Dubois M., Dumont C., Guerin T., Haffray S., Hammadi R., Muanga J., Pellouin V., Robert D., Wunderle E., Gauguet G., Roy A., Sainte-Marthe L., Verdier J., Verdier-Discala C., Hillier L.W., Fulton L., McPherson J., Matsuda F., Wilson R., Scarpelli C., Gyapay G., Wincker P., Saurin W., Quetier F., Waterston R., Hood L., Weissenbach J.
Nature 421:601-607(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL160471 Genomic DNA. No translation available.
RefSeqNP_001008397.1. NM_001008396.2.
UniGeneHs.385998.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000420358; ENSP00000399349; ENSG00000198554.
ENST00000421192; ENSP00000391049; ENSG00000198554.
GeneID11169.
KEGGhsa:11169.

Organism-specific databases

CTD11169.
HGNCHGNC:23170. WDHD1.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000170076.
KOK11274.

Family and domain databases

Gene3D1.10.30.10. 1 hit.
2.130.10.10. 1 hit.
InterProIPR022100. DUF3639.
IPR009071. HMG_box_dom.
IPR013979. TIF_beta_prop-like.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF12341. DUF3639. 1 hit.
PF08662. eIF2A. 1 hit.
PF00505. HMG_box. 1 hit.
PF00400. WD40. 1 hit.
[Graphical view]
SMARTSM00398. HMG. 1 hit.
SM00320. WD40. 3 hits.
[Graphical view]
SUPFAMSSF47095. SSF47095. 1 hit.
PROSITEPS50118. HMG_BOX_2. 1 hit.
PS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi11169.
NextBio42497.

Entry information

Entry nameC9JW18_HUMAN
AccessionPrimary (citable) accession number: C9JW18
Secondary accession number(s): F6W0U7
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 43 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.