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C9JVW0

- PRR24_HUMAN

UniProt

C9JVW0 - PRR24_HUMAN

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Protein

Proline-rich protein 24

Gene

INAFM1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Proline-rich protein 24Curated
Alternative name(s):
InaF-motif-containing protein 1Imported
Gene namesi
Name:INAFM1Imported
Synonyms:PRR24Imported
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:27406. INAFM1.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 142142Proline-rich protein 24PRO_0000394048Add
BLAST

Proteomic databases

PRIDEiC9JVW0.

Expressioni

Gene expression databases

BgeeiC9JVW0.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000407321.

Structurei

3D structure databases

ProteinModelPortaliC9JVW0.
ModBaseiSearch...
MobiDBiSearch...

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei36 – 5621HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi57 – 13377Pro-richAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG278648.
GeneTreeiENSGT00550000076229.
HOGENOMiHOG000170817.
InParanoidiC9JVW0.
OMAiMNSEECA.
OrthoDBiEOG7G4QJM.
PhylomeDBiC9JVW0.

Family and domain databases

InterProiIPR029162. InaF-motif.
[Graphical view]
PfamiPF15018. InaF-motif. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9JVW0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRGTSCVGGG AESPGGAGLS EGPRGRWLRL APVCAYFLCV SLAAVLLAVY
60 70 80 90 100
YGLIWVPTRS PAAPAGPQPS APSPPCAARP GVPPVPAPAA ASLSCLLGVP
110 120 130 140
GGPRPQLQLP LSRRRRYSDP DRRPSRQTPR ETPEAAEGRR PG
Length:142
Mass (Da):14,668
Last modified:November 3, 2009 - v1
Checksum:i9F25234D6106E829
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC008532 Genomic DNA. No translation available.
CCDSiCCDS46131.1.
RefSeqiNP_848606.3. NM_178511.5.
UniGeneiHs.128690.

Genome annotation databases

EnsembliENST00000552360; ENSP00000447679; ENSG00000257704.
GeneIDi255783.
KEGGihsa:255783.
UCSCiuc002pgi.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC008532 Genomic DNA. No translation available.
CCDSi CCDS46131.1.
RefSeqi NP_848606.3. NM_178511.5.
UniGenei Hs.128690.

3D structure databases

ProteinModelPortali C9JVW0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000407321.

Proteomic databases

PRIDEi C9JVW0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000552360 ; ENSP00000447679 ; ENSG00000257704 .
GeneIDi 255783.
KEGGi hsa:255783.
UCSCi uc002pgi.3. human.

Organism-specific databases

CTDi 255783.
GeneCardsi GC19P047778.
HGNCi HGNC:27406. INAFM1.
neXtProti NX_C9JVW0.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG278648.
GeneTreei ENSGT00550000076229.
HOGENOMi HOG000170817.
InParanoidi C9JVW0.
OMAi MNSEECA.
OrthoDBi EOG7G4QJM.
PhylomeDBi C9JVW0.

Miscellaneous databases

ChiTaRSi PRR24. human.
GenomeRNAii 255783.
NextBioi 92643.

Gene expression databases

Bgeei C9JVW0.

Family and domain databases

InterProi IPR029162. InaF-motif.
[Graphical view ]
Pfami PF15018. InaF-motif. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiPRR24_HUMAN
AccessioniPrimary (citable) accession number: C9JVW0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 18, 2010
Last sequence update: November 3, 2009
Last modified: October 29, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM

External Data

Dasty 3