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Protein
Submitted name:

Zinc finger protein with KRAB and SCAN domains 1

Gene

ZKSCAN1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein with KRAB and SCAN domains 1Imported
Gene namesi
Name:ZKSCAN1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

HGNCiHGNC:13101. ZKSCAN1.

PTM / Processingi

Proteomic databases

PaxDbiC9JRM9.
PeptideAtlasiC9JRM9.

Expressioni

Gene expression databases

BgeeiENSG00000106261.
ExpressionAtlasiC9JRM9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000323148.

Structurei

3D structure databases

ProteinModelPortaliC9JRM9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini56 – 12570SCAN boxInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains SCAN box domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118881.
HOGENOMiHOG000293234.

Family and domain databases

InterProiIPR008916. Retrov_capsid_C.
IPR003309. SCAN_dom.
[Graphical view]
PfamiPF02023. SCAN. 1 hit.
[Graphical view]
SMARTiSM00431. SCAN. 1 hit.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
PROSITEiPS50804. SCAN_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C9JRM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMTAESREAT GLSPQAAQEK DGIVIVKVEE EDEEDHMWGQ DSTLQDTPPP
60 70 80 90 100
DPEIFRQRFR RFCYQNTFGP REALSRLKEL CHQWLRPEIN TKEQILELLV
110 120
LEQFLSILPK ELQVWLQEYR PDSGE
Length:125
Mass (Da):14,730
Last modified:November 3, 2009 - v1
Checksum:iB1AADA235B7B48C1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei125 – 1251Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004522 Genomic DNA. No translation available.
AC093619 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000432317; ENSP00000394445; ENSG00000106261.
UCSCiuc064fxz.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004522 Genomic DNA. No translation available.
AC093619 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9JRM9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000323148.

Proteomic databases

PaxDbiC9JRM9.
PeptideAtlasiC9JRM9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000432317; ENSP00000394445; ENSG00000106261.
UCSCiuc064fxz.1. human.

Organism-specific databases

HGNCiHGNC:13101. ZKSCAN1.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118881.
HOGENOMiHOG000293234.

Miscellaneous databases

ChiTaRSiZKSCAN1. human.

Gene expression databases

BgeeiENSG00000106261.
ExpressionAtlasiC9JRM9. baseline and differential.

Family and domain databases

InterProiIPR008916. Retrov_capsid_C.
IPR003309. SCAN_dom.
[Graphical view]
PfamiPF02023. SCAN. 1 hit.
[Graphical view]
SMARTiSM00431. SCAN. 1 hit.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
PROSITEiPS50804. SCAN_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC9JRM9_HUMAN
AccessioniPrimary (citable) accession number: C9JRM9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 7, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.