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Protein
Submitted name:

Chromodomain Y-like protein

Gene

CDYL

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromodomain Y-like proteinImported
Gene namesi
Name:CDYLImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

HGNCiHGNC:1811. CDYL.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei115 – 135HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000153046.

PTM / Processingi

Proteomic databases

MaxQBiC9JQG7.
PaxDbiC9JQG7.
PeptideAtlasiC9JQG7.
PRIDEiC9JQG7.

Expressioni

Gene expression databases

BgeeiENSG00000153046.
ExpressionAtlasiC9JQG7. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000380718.

Structurei

3D structure databases

ProteinModelPortaliC9JQG7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0016. Eukaryota.
KOG1911. Eukaryota.
COG1024. LUCA.
GeneTreeiENSGT00760000119100.
HOGENOMiHOG000111507.

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR029045. ClpP/crotonase-like_dom.
IPR001753. Crotonase_core_superfam.
[Graphical view]
PfamiPF00378. ECH_1. 1 hit.
[Graphical view]
SUPFAMiSSF52096. SSF52096. 1 hit.

Sequencei

Sequence statusi: Fragment.

C9JQG7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAYNNGSRS GTSPFMDALT ANGTTNIQTS VTGVTASKRK FIDDRRDQPF
60 70 80 90 100
DKRLRFSVRQ TESAYRYRDI VVRKQDGFTH ILLSTKSSEN NSLNPEVMRE
110 120 130 140 150
VQSALSTAAA DDSKLVLLSA VGSVFCCGLD FIYFIRRLTD DRKRESTKMA
160 170
EAIRNFVNTF IQFKKPIIVA V
Length:171
Mass (Da):19,276
Last modified:November 3, 2009 - v1
Checksum:iB53B62005779A452
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei171Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022725 Genomic DNA. No translation available.
AL356747 Genomic DNA. No translation available.
AL359643 Genomic DNA. No translation available.
KF458074 Genomic DNA. No translation available.
KF458084 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000440139; ENSP00000394740; ENSG00000153046.
UCSCiuc063lov.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022725 Genomic DNA. No translation available.
AL356747 Genomic DNA. No translation available.
AL359643 Genomic DNA. No translation available.
KF458074 Genomic DNA. No translation available.
KF458084 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9JQG7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000380718.

Proteomic databases

MaxQBiC9JQG7.
PaxDbiC9JQG7.
PeptideAtlasiC9JQG7.
PRIDEiC9JQG7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000440139; ENSP00000394740; ENSG00000153046.
UCSCiuc063lov.1. human.

Organism-specific databases

HGNCiHGNC:1811. CDYL.
OpenTargetsiENSG00000153046.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0016. Eukaryota.
KOG1911. Eukaryota.
COG1024. LUCA.
GeneTreeiENSGT00760000119100.
HOGENOMiHOG000111507.

Miscellaneous databases

ChiTaRSiCDYL. human.

Gene expression databases

BgeeiENSG00000153046.
ExpressionAtlasiC9JQG7. baseline and differential.

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR029045. ClpP/crotonase-like_dom.
IPR001753. Crotonase_core_superfam.
[Graphical view]
PfamiPF00378. ECH_1. 1 hit.
[Graphical view]
SUPFAMiSSF52096. SSF52096. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC9JQG7_HUMAN
AccessioniPrimary (citable) accession number: C9JQG7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: November 2, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.