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Protein
Submitted name:

Leucine-rich repeat transmembrane neuronal protein 1

Gene

LRRTM1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Leucine-rich repeat transmembrane neuronal protein 1Imported
Gene namesi
Name:LRRTM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000162951.10
HGNCiHGNC:19408 LRRTM1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000162951

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500299742320 – 183Sequence analysisAdd BLAST164

Proteomic databases

PeptideAtlasiC9JPM9

Expressioni

Gene expression databases

BgeeiENSG00000162951
ExpressionAtlasiC9JPM9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9JPM9
SMRiC9JPM9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0619 Eukaryota
COG4886 LUCA
GeneTreeiENSGT00760000118777
HOGENOMiHOG000185833

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
PfamiView protein in Pfam
PF13855 LRR_8, 2 hits
SMARTiView protein in SMART
SM00369 LRR_TYP, 5 hits
PROSITEiView protein in PROSITE
PS51450 LRR, 5 hits

Sequencei

Sequence statusi: Fragment.

C9JPM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFLLLGLCL YWLLRRPSGV VLCLLGACFQ MLPAAPSGCP QLCRCEGRLL
60 70 80 90 100
YCEALNLTEA PHNLSGLLGL SLRYNSLSEL RAGQFTGLMQ LTWLYLDHNH
110 120 130 140 150
ICSVQGDAFQ KLRRVKELTL SSNQITQLPN TTFRPMPNLR SVDLSYNKLQ
160 170 180
ALAPDLFHGL RKLTTLHMRA NAIQFVPVRI FQD
Length:183
Mass (Da):20,674
Last modified:November 3, 2009 - v1
Checksum:i8B94E17EFAA23538
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei183Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016670 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000452811; ENSP00000389473; ENSG00000162951
UCSCiuc061lcx.1 human

Similar proteinsi

Entry informationi

Entry nameiC9JPM9_HUMAN
AccessioniPrimary (citable) accession number: C9JPM9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: March 28, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health