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Protein
Submitted name:

Transcription initiation factor TFIID subunit 6

Gene

TAF6

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription initiation factor TFIID subunit 6Imported
Gene namesi
Name:TAF6Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

HGNCiHGNC:11540. TAF6.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000106290.

PTM / Processingi

Proteomic databases

MaxQBiC9JIS2.
PaxDbiC9JIS2.
PeptideAtlasiC9JIS2.
PRIDEiC9JIS2.

Expressioni

Gene expression databases

BgeeiENSG00000106290.
ExpressionAtlasiC9JIS2. baseline and differential.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9606.ENSP00000399982.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 78TAFInterPro annotationAdd BLAST67

Phylogenomic databases

eggNOGiKOG2549. Eukaryota.
COG5095. LUCA.
GeneTreeiENSGT00640000091486.

Family and domain databases

InterProiView protein in InterPro
IPR009072. Histone-fold.
IPR004823. TAF_TATA-bd.
PfamiView protein in Pfam
PF02969. TAF. 1 hit.
SMARTiView protein in SMART
SM00803. TAF. 1 hit.
SUPFAMiSSF47113. SSF47113. 1 hit.

Sequencei

Sequence statusi: Fragment.

C9JIS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEEKKLKLS NTVLPSESMK VVAESMGIAQ IQEETCQLLT DEVSYRIKEI
60 70 80 90 100
AQDALKFMHM GKRQKLTTSD IDYALKLKNV EPLYGFHAQE FIPFRFASGG
110 120 130
GRELYFYEEK EVDLSDIINT PLPRVPLDVC LKAH
Length:134
Mass (Da):15,298
Last modified:November 3, 2009 - v1
Checksum:i38444E7BC7513726
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei134Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC073842 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000449571; ENSP00000390073; ENSG00000106290.
UCSCiuc064gaf.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC073842 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000399982.

Proteomic databases

MaxQBiC9JIS2.
PaxDbiC9JIS2.
PeptideAtlasiC9JIS2.
PRIDEiC9JIS2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000449571; ENSP00000390073; ENSG00000106290.
UCSCiuc064gaf.1. human.

Organism-specific databases

HGNCiHGNC:11540. TAF6.
OpenTargetsiENSG00000106290.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2549. Eukaryota.
COG5095. LUCA.
GeneTreeiENSGT00640000091486.

Miscellaneous databases

ChiTaRSiTAF6. human.

Gene expression databases

BgeeiENSG00000106290.
ExpressionAtlasiC9JIS2. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR009072. Histone-fold.
IPR004823. TAF_TATA-bd.
PfamiView protein in Pfam
PF02969. TAF. 1 hit.
SMARTiView protein in SMART
SM00803. TAF. 1 hit.
SUPFAMiSSF47113. SSF47113. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC9JIS2_HUMAN
AccessioniPrimary (citable) accession number: C9JIS2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 10, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.