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C9JHR8 (C9JHR8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:CD163 Ensembl ENSP00000379863
OrganismHomo sapiens (Human) [Reference proteome] Ensembl ENSP00000379863
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1154 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000379863

Ontologies

Keywords
   PTMDisulfide bond SAAS SAAS017448
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionscavenger receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C9JHR8 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 92A8915FB7279AB8

FASTA1,154124,932
        10         20         30         40         50         60 
MSKLRMVLLE DSGSADFRRH FVNLSPFTIT VVLLLSACFV TSSLGGTDKE LRLVDGENKC 

        70         80         90        100        110        120 
SGRVEVKVQE EWGTVCNNGW SMEAVSVICN QLGCPTAIKA PGWANSSAGS GRIWMDHVSC 

       130        140        150        160        170        180 
RGNESALWDC KHDGWGKHSN CTHQQDAGVT CSDGSNLEMR LTRGGNMCSG RIEIKFQGRW 

       190        200        210        220        230        240 
GTVCDDNFNI DHASVICRQL ECGSAVSFSG SSNFGEGSGP IWFDDLICNG NESALWNCKH 

       250        260        270        280        290        300 
QGWGKHNCDH AEDAGVICSK GADLSLRLVD GVTECSGRLE VRFQGEWGTI CDDGWDSYDA 

       310        320        330        340        350        360 
AVACKQLGCP TAVTAIGRVN ASKGFGHIWL DSVSCQGHEP AIWQCKHHEW GKHYCNHNED 

       370        380        390        400        410        420 
AGVTCSDGSD LELRLRGGGS RCAGTVEVEI QRLLGKVCDR GWGLKEADVV CRQLGCGSAL 

       430        440        450        460        470        480 
KTSYQVYSKI QATNTWLFLS SCNGNETSLW DCKNWQWGGL TCDHYEEAKI TCSAHREPRL 

       490        500        510        520        530        540 
VGGDIPCSGR VEVKHGDTWG SICDSDFSLE AASVLCRELQ CGTVVSILGG AHFGEGNGQI 

       550        560        570        580        590        600 
WAEEFQCEGH ESHLSLCPVA PRPEGTCSHS RDVGVVCSSK TQKTSLIGSH TVKGTGLGSH 

       610        620        630        640        650        660 
SCLFLKPCLL PGYTEIRLVN GKTPCEGRVE LKTLGAWGSL CNSHWDIEDA HVLCQQLKCG 

       670        680        690        700        710        720 
VALSTPGGAR FGKGNGQIWR HMFHCTGTEQ HMGDCPVTAL GASLCPSEQV ASVICSGNQS 

       730        740        750        760        770        780 
QTLSSCNSSS LGPTRPTIPE ESAVACIESG QLRLVNGGGR CAGRVEIYHE GSWGTICDDS 

       790        800        810        820        830        840 
WDLSDAHVVC RQLGCGEAIN ATGSAHFGEG TGPIWLDEMK CNGKESRIWQ CHSHGWGQQN 

       850        860        870        880        890        900 
CRHKEDAGVI CSEFMSLRLT SEASREACAG RLEVFYNGAW GTVGKSSMSE TTVGVVCRQL 

       910        920        930        940        950        960 
GCADKGKINP ASLDKAMSIP MWVDNVQCPK GPDTLWQCPS SPWEKRLASP SEETWITCDN 

       970        980        990       1000       1010       1020 
KIRLQEGPTS CSGRVEIWHG GSWGTVCDDS WDLDDAQVVC QQLGCGPALK AFKEAEFGQG 

      1030       1040       1050       1060       1070       1080 
TGPIWLNEVK CKGNESSLWD CPARRWGHSE CGHKEDAAVN CTDISVQKTP QKATTGRSSR 

      1090       1100       1110       1120       1130       1140 
QSSFIAVGIL GVVLLAIFVA LFFLTKKRRQ RQRLAVSSRG ENLVHQIQYR EMNSCLNADD 

      1150 
LDLMNSSGGH SEPH 

« Hide

References

« Hide 'large scale' references
[1]"The finished DNA sequence of human chromosome 12."
Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team
Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. expand/collapse author list , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A., null.
Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC131206 Genomic DNA. No translation available.
RefSeqXP_005253585.1. XM_005253528.2.
UniGeneHs.504641.

3D structure databases

ProteinModelPortalC9JHR8.
SMRC9JHR8. Positions 48-264, 277-366, 373-473, 479-581, 615-716, 747-857, 870-1063.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEC9JHR8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000396620; ENSP00000379863; ENSG00000177575.
GeneID9332.
KEGGhsa:9332.
UCSCuc009zfw.2. human.

Organism-specific databases

CTD9332.
HGNCHGNC:1631. CD163.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000290652.
KOK06545.

Gene expression databases

ArrayExpressC9JHR8.
BgeeC9JHR8.

Family and domain databases

Gene3D3.10.250.10. 9 hits.
InterProIPR001190. SRCR.
IPR017448. SRCR-like_dom.
[Graphical view]
PfamPF00530. SRCR. 9 hits.
[Graphical view]
PRINTSPR00258. SPERACTRCPTR.
SMARTSM00202. SR. 9 hits.
[Graphical view]
SUPFAMSSF56487. SSF56487. 9 hits.
PROSITEPS00420. SRCR_1. 4 hits.
PS50287. SRCR_2. 9 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCD163. human.
GenomeRNAi9332.
NextBio35486540.

Entry information

Entry nameC9JHR8_HUMAN
AccessionPrimary (citable) accession number: C9JHR8
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.