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Protein
Submitted name:

Angio-associated migratory cell protein

Gene

AAMP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

SignaLinkiC9JG97.

Names & Taxonomyi

Protein namesi
Submitted name:
Angio-associated migratory cell proteinImported
Gene namesi
Name:AAMPImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

HGNCiHGNC:18. AAMP.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiC9JG97.
PaxDbiC9JG97.
PRIDEiC9JG97.

Expressioni

Gene expression databases

BgeeiC9JG97.
ExpressionAtlasiC9JG97. baseline and differential.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
AENQ8WTP83EBI-10176499,EBI-8637627
BHLHE40O145033EBI-10176499,EBI-711810
VPS52Q8N1B43EBI-10176499,EBI-2799833

Protein-protein interaction databases

IntActiC9JG97. 4 interactions.
STRINGi9606.ENSP00000248450.

Structurei

3D structure databases

ProteinModelPortaliC9JG97.
SMRiC9JG97. Positions 64-411.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini68 – 415348WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0296. Eukaryota.
ENOG410XR6A. LUCA.
GeneTreeiENSGT00760000119390.
HOGENOMiHOG000261676.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
SMARTiSM00320. WD40. 8 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9JG97-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLSVPLTAS RAPSSNPLPK ADDLAQEMED VDFEEEEEEE GNEEGWVLEP
60 70 80 90 100
QEGVVGSMEG PDDSEVTFAL HSASVFCVSL DPKTNTLAVT GGEDDKAFVW
110 120 130 140 150
RLSDGELLFE CAGHKDSVTC AGFSHDSTLV ATGDMSGLLK VWQVDTKEEV
160 170 180 190 200
WSFEAGDLEW MEWHPRAPVL LAGTADGNTW MWKVPNGDCK TFQGPNCPAT
210 220 230 240 250
CGRVLPDGKR AVVGYEDGTI RIWDLKQGSP IHVLKGTEGH QGPLTCVAAN
260 270 280 290 300
QDGSLILTGS VDCQAKLVSA TTGKVVGVFR PETVASQPSL GEGEESESNS
310 320 330 340 350
VESLGFCSVM PLAAVGYLDG TLAIYDLATQ TLRHQCQHQS GIVQLLWEAG
360 370 380 390 400
TAVVYTCSLD GIVRLWDART GRLLTDYRGH TAEILDFALS KDASLVVTTS
410
GDHKAKVFCV QRPDR
Length:415
Mass (Da):44,693
Last modified:November 3, 2009 - v1
Checksum:i04091057ECAA1031
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021016 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000420660; ENSP00000416394; ENSG00000127837.
UCSCiuc061siy.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021016 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9JG97.
SMRiC9JG97. Positions 64-411.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiC9JG97. 4 interactions.
STRINGi9606.ENSP00000248450.

Proteomic databases

EPDiC9JG97.
PaxDbiC9JG97.
PRIDEiC9JG97.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000420660; ENSP00000416394; ENSG00000127837.
UCSCiuc061siy.1. human.

Organism-specific databases

HGNCiHGNC:18. AAMP.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG0296. Eukaryota.
ENOG410XR6A. LUCA.
GeneTreeiENSGT00760000119390.
HOGENOMiHOG000261676.

Enzyme and pathway databases

SignaLinkiC9JG97.

Miscellaneous databases

ChiTaRSiAAMP. human.
NextBioi35486400.

Gene expression databases

BgeeiC9JG97.
ExpressionAtlasiC9JG97. baseline and differential.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
SMARTiSM00320. WD40. 8 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
    Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H.
    , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.
    Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiC9JG97_HUMAN
AccessioniPrimary (citable) accession number: C9JG97
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: March 16, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.