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C9JFL3

- PHGR1_HUMAN

UniProt

C9JFL3 - PHGR1_HUMAN

Protein

Proline, histidine and glycine-rich protein 1

Gene

PHGR1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Proline, histidine and glycine-rich protein 1
    Gene namesi
    Name:PHGR1
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 15

    Organism-specific databases

    HGNCiHGNC:37226. PHGR1.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA165479224.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8282Proline, histidine and glycine-rich protein 1PRO_0000395029Add
    BLAST

    Expressioni

    Gene expression databases

    BgeeiC9JFL3.

    Structurei

    3D structure databases

    ProteinModelPortaliC9JFL3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi4 – 7976Gly-richAdd
    BLAST

    Phylogenomic databases

    OMAiKRYCESK.

    Sequencei

    Sequence statusi: Complete.

    C9JFL3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDPGPKGHCH CGGHGHPPGH CGPPPGHGPG PCGPPPHHGP GPCGPPPGHG   50
    PGPCGPPPHH GPGPCGPPPG HGPGHPPPGP HH 82
    Length:82
    Mass (Da):7,706
    Last modified:November 3, 2009 - v1
    Checksum:i4FD967F24A48532C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC013356 Genomic DNA. No translation available.
    BC061640 mRNA. No translation available.
    BC070498 mRNA. No translation available.
    BC109367 mRNA. No translation available.
    CCDSiCCDS45225.1.
    RefSeqiNP_001139115.1. NM_001145643.1.
    UniGeneiHs.447537.

    Genome annotation databases

    EnsembliENST00000448599; ENSP00000410024; ENSG00000233041.
    GeneIDi644844.
    KEGGihsa:644844.
    UCSCiuc010uco.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC013356 Genomic DNA. No translation available.
    BC061640 mRNA. No translation available.
    BC070498 mRNA. No translation available.
    BC109367 mRNA. No translation available.
    CCDSi CCDS45225.1.
    RefSeqi NP_001139115.1. NM_001145643.1.
    UniGenei Hs.447537.

    3D structure databases

    ProteinModelPortali C9JFL3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000448599 ; ENSP00000410024 ; ENSG00000233041 .
    GeneIDi 644844.
    KEGGi hsa:644844.
    UCSCi uc010uco.2. human.

    Organism-specific databases

    CTDi 644844.
    GeneCardsi GC15P040644.
    HGNCi HGNC:37226. PHGR1.
    neXtProti NX_C9JFL3.
    PharmGKBi PA165479224.
    GenAtlasi Search...

    Phylogenomic databases

    OMAi KRYCESK.

    Miscellaneous databases

    NextBioi 116735.
    PROi C9JFL3.

    Gene expression databases

    Bgeei C9JFL3.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
      Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
      , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
      Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiPHGR1_HUMAN
    AccessioniPrimary (citable) accession number: C9JFL3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 15, 2010
    Last sequence update: November 3, 2009
    Last modified: July 9, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 15
      Human chromosome 15: entries, gene names and cross-references to MIM

    External Data

    Dasty 3