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C9JFL3

- PHGR1_HUMAN

UniProt

C9JFL3 - PHGR1_HUMAN

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Protein

Proline, histidine and glycine-rich protein 1

Gene

PHGR1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Proline, histidine and glycine-rich protein 1
Gene namesi
Name:PHGR1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 15

Organism-specific databases

HGNCiHGNC:37226. PHGR1.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165479224.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8282Proline, histidine and glycine-rich protein 1PRO_0000395029Add
BLAST

Expressioni

Gene expression databases

BgeeiC9JFL3.

Structurei

3D structure databases

ProteinModelPortaliC9JFL3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi4 – 7976Gly-richAdd
BLAST

Phylogenomic databases

OMAiKRYCESK.

Sequencei

Sequence statusi: Complete.

C9JFL3 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDPGPKGHCH CGGHGHPPGH CGPPPGHGPG PCGPPPHHGP GPCGPPPGHG
60 70 80
PGPCGPPPHH GPGPCGPPPG HGPGHPPPGP HH
Length:82
Mass (Da):7,706
Last modified:November 3, 2009 - v1
Checksum:i4FD967F24A48532C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC013356 Genomic DNA. No translation available.
BC061640 mRNA. No translation available.
BC070498 mRNA. No translation available.
BC109367 mRNA. No translation available.
CCDSiCCDS45225.1.
RefSeqiNP_001139115.1. NM_001145643.1.
UniGeneiHs.447537.

Genome annotation databases

EnsembliENST00000448599; ENSP00000410024; ENSG00000233041.
GeneIDi644844.
KEGGihsa:644844.
UCSCiuc010uco.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC013356 Genomic DNA. No translation available.
BC061640 mRNA. No translation available.
BC070498 mRNA. No translation available.
BC109367 mRNA. No translation available.
CCDSi CCDS45225.1.
RefSeqi NP_001139115.1. NM_001145643.1.
UniGenei Hs.447537.

3D structure databases

ProteinModelPortali C9JFL3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000448599 ; ENSP00000410024 ; ENSG00000233041 .
GeneIDi 644844.
KEGGi hsa:644844.
UCSCi uc010uco.2. human.

Organism-specific databases

CTDi 644844.
GeneCardsi GC15P040644.
HGNCi HGNC:37226. PHGR1.
neXtProti NX_C9JFL3.
PharmGKBi PA165479224.
GenAtlasi Search...

Phylogenomic databases

OMAi KRYCESK.

Miscellaneous databases

GenomeRNAii 644844.
NextBioi 116735.
PROi C9JFL3.

Gene expression databases

Bgeei C9JFL3.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiPHGR1_HUMAN
AccessioniPrimary (citable) accession number: C9JFL3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: November 3, 2009
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 15
    Human chromosome 15: entries, gene names and cross-references to MIM

External Data

Dasty 3