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C9JCN9 (HSBPL_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Heat shock factor-binding protein 1-like protein 1
Gene names
Name:HSBP1L1
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length74 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the HSBP1 family.

Ontologies

Keywords
   DomainCoiled coil
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7474Heat shock factor-binding protein 1-like protein 1
PRO_0000394662

Regions

Coiled coil12 – 6554 Potential

Experimental info

Sequence conflict551K → N in AAI57849. Ref.3

Sequences

Sequence LengthMass (Da)Tools
C9JCN9 [UniParc].

Last modified June 15, 2010. Version 2.
Checksum: 92AF41A11C23FACB

FASTA748,384
        10         20         30         40         50         60 
MDVRGPEAPG GRALRDAAEN LFQELQEHFQ ALTATLNLRM EEMGNRIEDL QKNVKDLMVQ 

        70 
AGIENSIKEQ MLKT 

« Hide

References

[1]"DNA sequence and analysis of human chromosome 18."
Nusbaum C., Zody M.C., Borowsky M.L., Kamal M., Kodira C.D., Taylor T.D., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Abouelleil A., Allen N.R., Anderson S., Bloom T., Bugalter B., Butler J. expand/collapse author list , Cook A., DeCaprio D., Engels R., Garber M., Gnirke A., Hafez N., Hall J.L., Norman C.H., Itoh T., Jaffe D.B., Kuroki Y., Lehoczky J., Lui A., Macdonald P., Mauceli E., Mikkelsen T.S., Naylor J.W., Nicol R., Nguyen C., Noguchi H., O'Leary S.B., Piqani B., Smith C.L., Talamas J.A., Topham K., Totoki Y., Toyoda A., Wain H.M., Young S.K., Zeng Q., Zimmer A.R., Fujiyama A., Hattori M., Birren B.W., Sakaki Y., Lander E.S.
Nature 437:551-555(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC090360 Genomic DNA. No translation available.
AC114341 Genomic DNA. No translation available.
CH471117 Genomic DNA. Translation: EAW66638.1.
BC157848 mRNA. Translation: AAI57849.1.
RefSeqNP_001129652.1. NM_001136180.1.
UniGeneHs.191582.

3D structure databases

ProteinModelPortalC9JCN9.
SMRC9JCN9. Positions 11-55.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActC9JCN9. 1 interaction.
STRING9606.ENSP00000414236.

PTM databases

PhosphoSiteC9JCN9.

Proteomic databases

PaxDbC9JCN9.
PRIDEC9JCN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000451882; ENSP00000414236; ENSG00000226742.
GeneID440498.
KEGGhsa:440498.
UCSCuc002lno.4. human.

Organism-specific databases

CTD440498.
GeneCardsGC18P077724.
HGNCHGNC:37243. HSBP1L1.
HPAHPA048273.
neXtProtNX_C9JCN9.
PharmGKBPA165429036.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG327437.
HOGENOMHOG000217518.
HOVERGENHBG101197.
OMANLRMEEM.
OrthoDBEOG754HS8.
PhylomeDBC9JCN9.

Gene expression databases

ArrayExpressC9JCN9.
BgeeC9JCN9.

Family and domain databases

InterProIPR009643. HS1-bd.
[Graphical view]
PANTHERPTHR19424. PTHR19424. 1 hit.
PfamPF06825. HSBP1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio109294.
PROC9JCN9.

Entry information

Entry nameHSBPL_HUMAN
AccessionPrimary (citable) accession number: C9JCN9
Secondary accession number(s): B2RXG9
Entry history
Integrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: June 15, 2010
Last modified: April 16, 2014
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

Human chromosome 18

Human chromosome 18: entries, gene names and cross-references to MIM