Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Syndetin

Gene

VPS50

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SyndetinImported
Gene namesi
Name:VPS50Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000004766.15.
HGNCiHGNC:25956. VPS50.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000004766.

PTM / Processingi

Proteomic databases

MaxQBiC9JA29.
PaxDbiC9JA29.
PeptideAtlasiC9JA29.
PRIDEiC9JA29.

Expressioni

Gene expression databases

BgeeiENSG00000004766.
ExpressionAtlasiC9JA29. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliC9JA29.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 189Vps54_NInterPro annotationAdd BLAST136

Phylogenomic databases

eggNOGiKOG2939. Eukaryota.
ENOG410XS88. LUCA.
GeneTreeiENSGT00390000003442.
HOGENOMiHOG000213810.

Family and domain databases

InterProiView protein in InterPro
IPR019515. VPS54_N.
PfamiView protein in Pfam
PF10475. Vps54_N. 1 hit.

Sequencei

Sequence statusi: Fragment.

C9JA29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKIKSLMTR QGLKSPQESL SDLGAIESLR VPGKEEFREL REQPSDPQAE
60 70 80 90 100
QELINSIEQV YFSVDSFDIV KYELELPPVL NLQELEAYRD KLKQQQAAVS
110 120 130 140 150
KKVADLILEK QPAYVKELER VTSLQTGLQL AAVICTNGRR HLNIAKEGFT
160 170 180
QASLGLLANQ RKRQLLIGLL KSLRTIKTLQ RTDVRLSEM
Length:189
Mass (Da):21,487
Last modified:November 3, 2009 - v1
Checksum:iE36B463453EE79CC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei189Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002379 Genomic DNA. No translation available.
AC002453 Genomic DNA. No translation available.
KF511049 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000458530; ENSP00000405553; ENSG00000004766.
UCSCiuc064fjk.1. human.

Similar proteinsi

Entry informationi

Entry nameiC9JA29_HUMAN
AccessioniPrimary (citable) accession number: C9JA29
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 25, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported