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Protein
Submitted name:

Translocon-associated protein subunit gamma

Gene

SSR3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Translocon-associated protein subunit gammaImported
Gene namesi
Name:SSR3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:11325. SSR3.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei30 – 48HelicalSequence analysisAdd BLAST19
Transmembranei60 – 77HelicalSequence analysisAdd BLAST18
Transmembranei138 – 157HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000114850.

PTM / Processingi

Proteomic databases

MaxQBiC9JA28.
PaxDbiC9JA28.
PeptideAtlasiC9JA28.
PRIDEiC9JA28.

Expressioni

Gene expression databases

BgeeiENSG00000114850.
ExpressionAtlasiC9JA28. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiC9JA28. 17 interactors.
STRINGi9606.ENSP00000265044.

Structurei

3D structure databases

ProteinModelPortaliC9JA28.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4490. Eukaryota.
ENOG410XR1X. LUCA.
GeneTreeiENSGT00390000000970.
HOGENOMiHOG000007534.

Family and domain databases

InterProiIPR009779. SSR3.
[Graphical view]
PANTHERiPTHR13399. PTHR13399. 1 hit.
PfamiPF07074. TRAP-gamma. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C9JA28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPKGSSKQQ SEEDLLLQDF SRNLSAKSSA LFFGNAFIVS AIPIWLYWRI
60 70 80 90 100
WHMDLIQSAV LYSVMTLVST YLVAFAYKNV KFVLKHKVAQ KREDAVSKEV
110 120 130 140 150
TRKLSEADNR KMSRKEKDER ILWKKNEVAD YEATTFSIFY NNTLFLVVVI
160 170
VASFFILKNF NPTVYPFQGT TYCP
Length:174
Mass (Da):20,161
Last modified:November 3, 2009 - v1
Checksum:i46B460BD203DFC33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092927 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000476217; ENSP00000417530; ENSG00000114850.
UCSCiuc062pgk.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC092927 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9JA28.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiC9JA28. 17 interactors.
STRINGi9606.ENSP00000265044.

Proteomic databases

MaxQBiC9JA28.
PaxDbiC9JA28.
PeptideAtlasiC9JA28.
PRIDEiC9JA28.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000476217; ENSP00000417530; ENSG00000114850.
UCSCiuc062pgk.1. human.

Organism-specific databases

HGNCiHGNC:11325. SSR3.
OpenTargetsiENSG00000114850.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4490. Eukaryota.
ENOG410XR1X. LUCA.
GeneTreeiENSGT00390000000970.
HOGENOMiHOG000007534.

Miscellaneous databases

ChiTaRSiSSR3. human.

Gene expression databases

BgeeiENSG00000114850.
ExpressionAtlasiC9JA28. baseline and differential.

Family and domain databases

InterProiIPR009779. SSR3.
[Graphical view]
PANTHERiPTHR13399. PTHR13399. 1 hit.
PfamiPF07074. TRAP-gamma. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC9JA28_HUMAN
AccessioniPrimary (citable) accession number: C9JA28
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: November 2, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.