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C9J9W2

- C9J9W2_HUMAN

UniProt

C9J9W2 - C9J9W2_HUMAN

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Protein
Submitted name:

LIM and SH3 domain protein 1

Gene

LASP1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. ion transmembrane transporter activity Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
LIM and SH3 domain protein 1Imported
Gene namesi
Name:LASP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 17

Organism-specific databases

HGNCiHGNC:6513. LASP1.

Subcellular locationi

GO - Cellular componenti

  1. cortical actin cytoskeleton Source: Ensembl
  2. focal adhesion Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiC9J9W2.

Expressioni

Gene expression databases

BgeeiC9J9W2.
ExpressionAtlasiC9J9W2. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliC9J9W2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000062924.
HOGENOMiHOG000006616.

Family and domain databases

InterProiIPR000900. Nebulin_repeat.
[Graphical view]
PfamiPF00880. Nebulin. 2 hits.
[Graphical view]
SMARTiSM00227. NEBU. 2 hits.
[Graphical view]
PROSITEiPS51216. NEBULIN. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C9J9W2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTLNMKNYKG YEKKPYCNAH YPKQSFTMVA DTPENLRLKQ QSELQSQVRY
60 70 80 90 100
KEEFEKNKGK GFSVVADTPE LQRIKKTQDQ ISNIKYHEEF EKSRMGPSGG
110 120 130 140 150
EGMEPERRDS QDGSSYRRPL EQQQPHHIPT SAPVYQQPQQ QPVAQSYGGY
160
KEPAAPVSIQ RSAPGG
Length:166
Mass (Da):18,980
Last modified:November 3, 2009 - v1
Checksum:i2A377D940BC5F061
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei166 – 1661Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006441 Genomic DNA. No translation available.
AC110749 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000419929; ENSP00000391897; ENSG00000002834.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006441 Genomic DNA. No translation available.
AC110749 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali C9J9W2.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi C9J9W2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000419929 ; ENSP00000391897 ; ENSG00000002834 .

Organism-specific databases

HGNCi HGNC:6513. LASP1.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00530000062924.
HOGENOMi HOG000006616.

Miscellaneous databases

ChiTaRSi LASP1. human.
NextBioi 35485641.

Gene expression databases

Bgeei C9J9W2.
ExpressionAtlasi C9J9W2. baseline and differential.

Family and domain databases

InterProi IPR000900. Nebulin_repeat.
[Graphical view ]
Pfami PF00880. Nebulin. 2 hits.
[Graphical view ]
SMARTi SM00227. NEBU. 2 hits.
[Graphical view ]
PROSITEi PS51216. NEBULIN. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
    Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
    , Chen C.K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
    Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra."
    Yu L.R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.
    J. Proteome Res. 6:4150-4162(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
    Mayya V., Lundgren D.H., Hwang S.I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
    Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
    Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M.
    Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  7. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  8. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  9. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiC9J9W2_HUMAN
AccessioniPrimary (citable) accession number: C9J9W2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3