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Protein
Submitted name:

Coiled-coil domain-containing protein 80

Gene

CCDC80

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Coiled-coil domain-containing protein 80Imported
Gene namesi
Name:CCDC80Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 3

Organism-specific databases

HGNCiHGNC:30649. CCDC80.

Expressioni

Gene expression databases

BgeeiC9J8I6.
ExpressionAtlasiC9J8I6. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliC9J8I6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00730000110685.

Family and domain databases

InterProiIPR025232. DUF4174.
[Graphical view]
PfamiPF13778. DUF4174. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C9J8I6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALRSMGQFS VFFFFFFWAQ KKIASLSHSG FLHWFLLFEA VSSNGVLLFF
60 70 80 90 100
SRFRWRRRLL VISAPNDEDW AYSQQLSALS GQACNFGLRH ITILKLLGVG
110 120 130 140 150
EEVGGVLELF PINGSSVVER EDVPAHLVKD IRNYFQVSPE YFSMLLVGKD
160 170 180 190 200
GNVKSWYPSP MWSMVIVYDL IDSMQLRRQE MAIQQSLGMR CPEDEYAGYG
210
YHSYHQGYQD GY
Length:212
Mass (Da):24,488
Last modified:November 3, 2009 - v1
Checksum:iC69A661EB43D12DF
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei212 – 2121Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC048334 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000479368; ENSP00000418188; ENSG00000091986.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC048334 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9J8I6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000479368; ENSP00000418188; ENSG00000091986.

Organism-specific databases

HGNCiHGNC:30649. CCDC80.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00730000110685.

Miscellaneous databases

ChiTaRSiCCDC80. human.
NextBioi35485468.

Gene expression databases

BgeeiC9J8I6.
ExpressionAtlasiC9J8I6. baseline and differential.

Family and domain databases

InterProiIPR025232. DUF4174.
[Graphical view]
PfamiPF13778. DUF4174. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence, annotation and analysis of human chromosome 3."
    Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
    , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
    Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiC9J8I6_HUMAN
AccessioniPrimary (citable) accession number: C9J8I6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: January 7, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.