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Protein
Submitted name:

RANBP2-like and GRIP domain-containing protein 5/6

Gene

RGPD5

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
RANBP2-like and GRIP domain-containing protein 5/6Imported
Submitted name:
RANBP2-like and GRIP domain-containing protein 8Imported
Gene namesi
Name:RGPD5Imported
Synonyms:RGPD8Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000015568.12.
HostDB:ENSG00000169629.11.
HGNCiHGNC:32418. RGPD5.
HGNC:9849. RGPD8.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000015568.
ENSG00000169629.

PTM / Processingi

Proteomic databases

MaxQBiC9J6W1.

Expressioni

Gene expression databases

BgeeiENSG00000015568.
ExpressionAtlasiC9J6W1. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 64TPR_REGIONInterPro annotationAdd BLAST34
Repeati31 – 64TPRPROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

RepeatSAAS annotation, TPR repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0864. Eukaryota.
KOG0865. Eukaryota.
COG0652. LUCA.
COG5171. LUCA.
GeneTreeiENSGT00760000119119.

Family and domain databases

InterProiView protein in InterPro
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
PfamiView protein in Pfam
PF00515. TPR_1. 1 hit.
SMARTiView protein in SMART
SM00028. TPR. 1 hit.
SUPFAMiSSF48452. SSF48452. 1 hit.
PROSITEiView protein in PROSITE
PS50005. TPR. 1 hit.
PS50293. TPR_REGION. 1 hit.

Sequencei

Sequence statusi: Fragment.

C9J6W1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWSGTSPRCW VSPRRLDRYI CTYINVQERD PKAHRFLGLL YELEENTEKA
60 70 80 90 100
VECYRRSVEL NPTQKDLVLK IAELLCKNDV TDGRAKYWVE RAAKLFPGSP
110 120 130 140 150
AIYKLKEQLL DCEGEDGWNK LFDLIQSELY VRPDDVHVNI RLVELYRSTK

RL
Length:152
Mass (Da):17,952
Last modified:November 3, 2009 - v1
Checksum:iAF1886B880A1232D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei152Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013271 Genomic DNA. No translation available.
AC112246 Genomic DNA. No translation available.
AC115115 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000441344; ENSP00000411548; ENSG00000015568.
ENST00000496537; ENSP00000430052; ENSG00000169629.
UCSCiuc061mtr.1. human.

Similar proteinsi

Entry informationi

Entry nameiC9J6W1_HUMAN
AccessioniPrimary (citable) accession number: C9J6W1
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 25, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported