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C9J5N1

- C9J5N1_HUMAN

UniProt

C9J5N1 - C9J5N1_HUMAN

Protein
Submitted name:

Protein PTGES3L-AARSD1

Gene

PTGES3L-AARSD1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (03 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alanine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: InterPro
    3. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. alanyl-tRNA aminoacylation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein PTGES3L-AARSD1Imported
    Gene namesi
    Name:PTGES3L-AARSD1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 17

    Organism-specific databases

    HGNCiHGNC:43946. PTGES3L-AARSD1.

    PTM / Processingi

    Proteomic databases

    MaxQBiC9J5N1.

    Expressioni

    Gene expression databases

    BgeeiC9J5N1.

    Structurei

    3D structure databases

    ProteinModelPortaliC9J5N1.
    SMRiC9J5N1. Positions 1-79, 81-330.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000230967.

    Family and domain databases

    Gene3Di2.60.40.790. 1 hit.
    InterProiIPR018165. Ala-tRNA-synth_IIc_core.
    IPR018164. Ala-tRNA-synth_IIc_N.
    IPR007052. CS_dom.
    IPR008978. HSP20-like_chaperone.
    IPR018163. Thr/Ala-tRNA-synth_IIc_edit.
    IPR009000. Transl_B-barrel.
    IPR012947. tRNA_SAD.
    [Graphical view]
    PfamiPF01411. tRNA-synt_2c. 1 hit.
    PF07973. tRNA_SAD. 1 hit.
    [Graphical view]
    SMARTiSM00863. tRNA_SAD. 1 hit.
    [Graphical view]
    SUPFAMiSSF49764. SSF49764. 1 hit.
    SSF50447. SSF50447. 1 hit.
    SSF55186. SSF55186. 1 hit.
    PROSITEiPS50860. AA_TRNA_LIGASE_II_ALA. 1 hit.
    PS51203. CS. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C9J5N1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEFCVEDSTD VHVLIEDHRI VFSCKNADGV ELYNEIEFYA KVNSKDSQDK    50
    RSSRSITCFV RKWKEKVAWP RLTKEDIKLL KKVSTKRPPP AMDDLDFTTT 100
    VVSCCPAELQ TEGSNGKKEV LSGFQVVLED TVLFPEGGGQ PDDRGTINDI 150
    SVLRVTRRGE QADHFTQTPL DPGSQVLVRV DWERRFDHMQ QHSGQHLITA 200
    VADHLFKLKT TSWELGRFRS AIELDTPSMT AEQVAAIEQS VNEKIRDRLP 250
    VNVRELSLDD PEVEQVSGRG LPDDHAGPIR VVNIEGVDSN MCCGTHVSNL 300
    SDLQVIKILG TEKGKKNRTN LIFLSGNRVL KWMERSHGTE KALTALLKCG 350
    AEDHVEAVKK LQNSTKILQK NNLNLLRDLA VHIAHSLRNS PDWGGVVILH 400
    RKEGDSEFMN IIANEIGSEE TLLFLTVGDE KGGGLFLLAG PPASVETLGP 450
    RVAEVLEGKG AGKKGRFQGK ATKMSRRMEA QALLQDYIST QSAKE 495
    Length:495
    Mass (Da):55,066
    Last modified:November 3, 2009 - v1
    Checksum:iEBB6575CC3625575
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC055866 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000409103; ENSP00000386254; ENSG00000108825.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC055866 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali C9J5N1.
    SMRi C9J5N1. Positions 1-79, 81-330.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    MaxQBi C9J5N1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000409103 ; ENSP00000386254 ; ENSG00000108825 .

    Organism-specific databases

    HGNCi HGNC:43946. PTGES3L-AARSD1.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000230967.

    Miscellaneous databases

    NextBioi 35485088.

    Gene expression databases

    Bgeei C9J5N1.

    Family and domain databases

    Gene3Di 2.60.40.790. 1 hit.
    InterProi IPR018165. Ala-tRNA-synth_IIc_core.
    IPR018164. Ala-tRNA-synth_IIc_N.
    IPR007052. CS_dom.
    IPR008978. HSP20-like_chaperone.
    IPR018163. Thr/Ala-tRNA-synth_IIc_edit.
    IPR009000. Transl_B-barrel.
    IPR012947. tRNA_SAD.
    [Graphical view ]
    Pfami PF01411. tRNA-synt_2c. 1 hit.
    PF07973. tRNA_SAD. 1 hit.
    [Graphical view ]
    SMARTi SM00863. tRNA_SAD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49764. SSF49764. 1 hit.
    SSF50447. SSF50447. 1 hit.
    SSF55186. SSF55186. 1 hit.
    PROSITEi PS50860. AA_TRNA_LIGASE_II_ALA. 1 hit.
    PS51203. CS. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
      Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
      , Chen C.K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
      Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiC9J5N1_HUMAN
    AccessioniPrimary (citable) accession number: C9J5N1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 3, 2009
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3