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Protein
Submitted name:

Translocon-associated protein subunit alpha

Gene

SSR1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Translocon-associated protein subunit alphaImported
Gene namesi
Name:SSR1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000124783.12
HGNCiHGNC:11323 SSR1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei208 – 229HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000124783

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500299760722 – 265Sequence analysisAdd BLAST244

Proteomic databases

MaxQBiC9J3L8
PeptideAtlasiC9J3L8
PRIDEiC9J3L8

Expressioni

Gene expression databases

BgeeiENSG00000124783
ExpressionAtlasiC9J3L8 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9J3L8
SMRiC9J3L8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1631 Eukaryota
ENOG410XNTM LUCA
GeneTreeiENSGT00400000022103
HOGENOMiHOG000006932

Family and domain databases

InterProiView protein in InterPro
IPR005595 TRAP_alpha
PfamiView protein in Pfam
PF03896 TRAP_alpha, 1 hit

Sequencei

Sequence statusi: Complete.

C9J3L8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLPRLLLL LLLVFPATVL FRGGPRGLLA VAQDLTEDEE TVEDSIIEDE
60 70 80 90 100
DDEAEVEEDE PTDLVEDKEE EDVSGEPEAS PSADTTILFV KGEDFPANNI
110 120 130 140 150
VKFLVGFTNK GTEDFIVESL DASFRYPQDY QFYIQNFTAL PLNTVVPPQR
160 170 180 190 200
QATFEYSFIP AEPMGGRPFG LVINLNYKDL NGNVFQDAVF NQTVTVIERE
210 220 230 240 250
DGLDGETIFM YMFLAGLGLL VIVGLHQLLE SRKSGSFIQD GVQWHNLAYC
260
NLRLRGSSHP PTSAS
Length:265
Mass (Da):29,573
Last modified:November 3, 2009 - v1
Checksum:i6B255F336E96F953
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL139095 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000462112; ENSP00000417290; ENSG00000124783
UCSCiuc063lqz.1 human

Similar proteinsi

Entry informationi

Entry nameiC9J3L8_HUMAN
AccessioniPrimary (citable) accession number: C9J3L8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: March 28, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health