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C9J069

- CI172_HUMAN

UniProt

C9J069 - CI172_HUMAN

Protein

Uncharacterized protein C9orf172

Gene

C9orf172

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (03 Nov 2009)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C9orf172
    Gene namesi
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 9

    Organism-specific databases

    HGNCiHGNC:37284. C9orf172.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA165585544.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 976976Uncharacterized protein C9orf172PRO_0000392544Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei129 – 1291PhosphoserineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PaxDbiC9J069.
    PRIDEiC9J069.

    PTM databases

    PhosphoSiteiC9J069.

    Expressioni

    Gene expression databases

    BgeeiC9J069.

    Organism-specific databases

    HPAiHPA021200.

    Structurei

    3D structure databases

    ProteinModelPortaliC9J069.
    SMRiC9J069. Positions 656-713.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi68 – 422355Pro-richAdd
    BLAST

    Phylogenomic databases

    eggNOGiNOG324574.
    HOGENOMiHOG000231560.
    OMAiREPDMET.
    OrthoDBiEOG7M0NRT.
    PhylomeDBiC9J069.
    TreeFamiTF323946.

    Sequencei

    Sequence statusi: Complete.

    C9J069-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRTDPPDLL VSTVYQDIKV ATPGPASKCS PCERSVARPA EPAPFNKRHC    50
    RSFDFLEALD GPAMETLPEP PPPESAVPRA RTREAEPRRR ARSKSAPRAP 100
    PGLTPAPASP PVLPRRGREA QRAARAEASP RREPAYPALR ALANELHPIK 150
    LQPQRGGPGR VAPLCAAAGR CAPPEPPAGP APHVRCRLDI KPDDAVLQHA 200
    TRGSRSCGPT EAAHWARPAP QFHGLTVPGP RHMALSRTPT PSDSYCADPR 250
    AFYCDGPLPG PRDYAERRSL PFTTPPGPTQ FFYTEEPQGF RGSFAASPGP 300
    TFDAYYPRPY PSEELSGPSP RRMGGYYAGE VRTFPIQEPP SRSYYGEAPR 350
    AYGLPYGPRY VPEEPRAHST ARPFYTEDFG RYRERDVLAR TYPHPRSSPA 400
    WADWGPRPYR TLQVVPPSDP DPLLASWHGG TGTSPPRLAT DSRHYSRSWD 450
    NILAPGPRRE DPLGRGRSYE NLLGREVREP RGVSPEGRRP PVVVNLSTSP 500
    RRYAALSLSE TSLTEKGRAG EGLGRNWYVT PEITITDNDL RATERPSARA 550
    WELPGGRTRP PPHAAPDGPT SGRQRSLEQL DELITDLVID SRPTAGQASE 600
    PAADCLGPQL RRLLDSRPAG SGAPALAPPR SPPASAGSAE EPAAPGEAAD 650
    ASPEPSADED DLMTCSNARC RRTETMFNAC LYFKSCHSCY TYYCSRLCRR 700
    EDWDAHKARC VYGRVGSVCR HVLQFCRDSG PVHRAFSRIA RVGFLSRGRG 750
    VLFLGFPSPG SADNFLRFGL EGLLLSPTYL SLRELATHAA PLGSYARELA 800
    AAGRLYEPAE CFLLSVSVAV GPGTAPPGTP ALPAPAPRSH GPTVRKFAKV 850
    ALAAGSPARP PPARSREPDM ETLILTPPPG TAGLDQDGEA GRRAREVAFI 900
    HIQRELRLRG VFLRHEFPRV YEQLCEFVEA NRRFTPTTIY PTDRRTGRPF 950
    MCMIMAASEP RALDWVASAN LLDDIM 976
    Length:976
    Mass (Da):106,650
    Last modified:November 3, 2009 - v1
    Checksum:i7DB1CCE956BCA47D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL355987 Genomic DNA. No translation available.
    CCDSiCCDS48059.1.
    RefSeqiNP_001073951.2. NM_001080482.2.
    UniGeneiHs.495485.

    Genome annotation databases

    EnsembliENST00000436881; ENSP00000412388; ENSG00000232434.
    GeneIDi389813.
    KEGGihsa:389813.
    UCSCiuc011meh.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL355987 Genomic DNA. No translation available.
    CCDSi CCDS48059.1.
    RefSeqi NP_001073951.2. NM_001080482.2.
    UniGenei Hs.495485.

    3D structure databases

    ProteinModelPortali C9J069.
    SMRi C9J069. Positions 656-713.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei C9J069.

    Proteomic databases

    PaxDbi C9J069.
    PRIDEi C9J069.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000436881 ; ENSP00000412388 ; ENSG00000232434 .
    GeneIDi 389813.
    KEGGi hsa:389813.
    UCSCi uc011meh.2. human.

    Organism-specific databases

    CTDi 389813.
    GeneCardsi GC09P139738.
    HGNCi HGNC:37284. C9orf172.
    HPAi HPA021200.
    neXtProti NX_C9J069.
    PharmGKBi PA165585544.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG324574.
    HOGENOMi HOG000231560.
    OMAi REPDMET.
    OrthoDBi EOG7M0NRT.
    PhylomeDBi C9J069.
    TreeFami TF323946.

    Miscellaneous databases

    GenomeRNAii 389813.
    NextBioi 103105.

    Gene expression databases

    Bgeei C9J069.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of human chromosome 9."
      Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
      , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
      Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiCI172_HUMAN
    AccessioniPrimary (citable) accession number: C9J069
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 23, 2010
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 9
      Human chromosome 9: entries, gene names and cross-references to MIM

    External Data

    Dasty 3