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Protein
Submitted name:

Protein polybromo-1

Gene

PBRM1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Protein polybromo-1Imported
Gene namesi
Name:PBRM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:30064. PBRM1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000163939.

PTM / Processingi

Proteomic databases

MaxQBiC9J053.
PaxDbiC9J053.
PeptideAtlasiC9J053.
PRIDEiC9J053.

Expressioni

Gene expression databases

BgeeiENSG00000163939.
ExpressionAtlasiC9J053. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000378307.

Structurei

3D structure databases

ProteinModelPortaliC9J053.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 118BromoInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiKOG1827. Eukaryota.
COG5076. LUCA.
GeneTreeiENSGT00390000003017.
HOGENOMiHOG000207828.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C9J053-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSKRRRATS PSSSVSGDFD DGHHSVSTPG PSRKRRRLSN LPTVDPIAVC
60 70 80 90 100
HELYNTIRDY KDEQGRLLCE LFIRAPKRRN QPDYYEVVSQ PIDLMKIQQK
110
LKMEEYDDVN LLTADFQL
Length:118
Mass (Da):13,638
Last modified:November 3, 2009 - v1
Checksum:iEF3E06E02DF9D322
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei118Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104446 Genomic DNA. No translation available.
AC112215 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000449505; ENSP00000412401; ENSG00000163939.
UCSCiuc062kob.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104446 Genomic DNA. No translation available.
AC112215 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliC9J053.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000378307.

Proteomic databases

MaxQBiC9J053.
PaxDbiC9J053.
PeptideAtlasiC9J053.
PRIDEiC9J053.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000449505; ENSP00000412401; ENSG00000163939.
UCSCiuc062kob.1. human.

Organism-specific databases

HGNCiHGNC:30064. PBRM1.
OpenTargetsiENSG00000163939.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1827. Eukaryota.
COG5076. LUCA.
GeneTreeiENSGT00390000003017.
HOGENOMiHOG000207828.

Miscellaneous databases

ChiTaRSiPBRM1. human.

Gene expression databases

BgeeiENSG00000163939.
ExpressionAtlasiC9J053. baseline and differential.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC9J053_HUMAN
AccessioniPrimary (citable) accession number: C9J053
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: November 30, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.